RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CGB7P0DN87 165 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 UBA52P62987 128 aaKnown RBP16.24■□□□□ 0.19
COL9A3-202ENST00000452372 ACTG1P63261 375 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 QRFPP83859 136 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 RBM39Q14498 530 aaKnown RBP16.24■□□□□ 0.19
COL9A3-202ENST00000452372 SLC35E4Q6ICL7 350 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 OR10K2Q6IF99 312 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 BRICD5Q6PL45 260 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 ZMAT3Q9HA38 289 aaKnown RBP16.24■□□□□ 0.19
COL9A3-202ENST00000452372 TXNL4BQ9NX01 149 aaKnown RBP16.24■□□□□ 0.19
COL9A3-202ENST00000452372 SESN1Q9Y6P5 492 aa16.24■□□□□ 0.19
COL9A3-202ENST00000452372 ZNF729A6NN14 1252 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-202ENST00000452372 TMEM14DPA8MWL7 114 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 MCRIP1C9JLW8 97 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 HOXA3O43365 443 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-202ENST00000452372 GLAP06280 429 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 MELTFP08582 738 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 FBP1P09467 338 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 ARSBP15848 533 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 FUT3P21217 361 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 COX7A1P24310 79 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 MYL9P24844 172 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 RANBP1P43487 201 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 RPS27AP62979 156 aaKnown RBP16.23■□□□□ 0.19
COL9A3-202ENST00000452372 UNC119Q13432 240 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 P2RY14Q15391 338 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 SLC9A3R2Q15599 337 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 RAB11BQ15907 218 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 SIGIRRQ6IA17 410 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 RAB12Q6IQ22 244 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 HEPN1Q6WQI6 88 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 LDLRAD3Q86YD5 345 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 SSR3Q9UNL2 185 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 PEX16Q9Y5Y5 336 aa16.23■□□□□ 0.19
COL9A3-202ENST00000452372 MMP23AO75900 390 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 C17orf58Q2M2W7 97 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 OR52W1Q6IF63 320 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 OR2W3Q7Z3T1 314 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 TMEM86BQ8N661 226 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 OR11H6Q8NGC7 330 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 OR13A1Q8NGR1 328 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 NEK7Q8TDX7 302 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 DUX5Q96PT3 197 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 TM2D1Q9BX74 207 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 TMEM59Q9BXS4 323 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 OR51E2Q9H255 320 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 TMEM133Q9H2Q1 129 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 VCX3AQ9NNX9 186 aa16.22■□□□□ 0.19
COL9A3-202ENST00000452372 KBTBD11-OT1A0A1B0GTJ5 212 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 TMEM30CPA0ZSE6 113 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 TRIM64CA6NLI5 447 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 RNASE1P07998 156 aaKnown RBP16.21■□□□□ 0.19
COL9A3-202ENST00000452372 CD36P16671 472 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 RAB3BP20337 219 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 CDK2P24941 298 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 LGALS4P56470 323 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 ZNF497Q6ZNH5 498 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 OR51D1Q8NGF3 324 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 SSMEM1Q8WWF3 244 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 FAM3DQ96BQ1 224 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 AJUBAQ96IF1 538 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 KCNK15Q9H427 330 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 LINC00574Q9H8X3 128 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 FBLN5Q9UBX5 448 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 STEAP1Q9UHE8 339 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 POMT1Q9Y6A1 747 aa16.21■□□□□ 0.19
COL9A3-202ENST00000452372 ODF3BA8MYP8 253 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 PDCD6O75340 191 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 PAHP00439 452 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 MT-ND4P03905 459 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 GLP1RP43220 463 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 IER3P46695 156 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 CLDN12P56749 244 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 OR10A3P58181 314 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 C2orf76Q3KRA6 126 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 PRAMEF5Q5TYX0 476 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 ZNF626Q68DY1 528 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 GAPTQ8N292 157 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 C3orf56Q8N813 242 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 ZNRD1Q9P1U0 126 aa16.2■□□□□ 0.18
COL9A3-202ENST00000452372 IGHV2-26A0A0B4J1V2 119 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 IFITM5A6NNB3 132 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 NPIPB11E5RHQ5 1161 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 CA11O75493 328 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 ARG1P05089 322 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 JUNBP17275 347 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-202ENST00000452372 GZMHP20718 246 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 OMGP23515 440 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 GADD45AP24522 165 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 GDNFP39905 211 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 AWAT1Q58HT5 328 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 HES5Q5TA89 166 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 TPRA1Q86W33 373 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 BEND2Q8NDZ0 799 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 MRGPRDQ8TDS7 321 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 C17orf50Q8WW18 174 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 KCTD7Q96MP8 289 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 NEDD4LQ96PU5 975 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 CHCHD6Q9BRQ6 235 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 URM1Q9BTM9 101 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms