RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 OR2G2Q8NGZ5 317 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 OR10AC1Q8NH08 325 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 RNASE11Q8TAA1 199 aaKnown RBP8.35□□□□□ -1.07
CCDC171-203ENST00000449575 FAM71F1Q96KD3 344 aaPredicted RBP8.35□□□□□ -1.07
CCDC171-203ENST00000449575 A0A1B0GTI1 187 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 TMEM272A0A1B0GTI8 110 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 A0A1W2PPK0 400 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 CD300LBA8K4G0 201 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 J3QW42 95 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 MLNRO43193 412 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 SPRY3O43610 288 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 IGLV3-1P01715 115 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 IGHV4-39P01824 125 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 ZNF44P15621 663 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 KITLGP21583 273 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 CDK2P24941 298 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 RAB4BP61018 213 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 CCL8P80075 99 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 MALLQ13021 153 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 HMGN3Q15651 99 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 UNQ6126/PRO20091Q6UXV3 157 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 SSX9Q7RTT3 188 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 OR5M8Q8NGP6 311 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 PDCD1LG2Q9BQ51 273 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 OR10A2Q9H208 303 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 DYNLRB1Q9NP97 96 aa8.35□□□□□ -1.07
CCDC171-203ENST00000449575 YLPM1P49750 1951 aaKnown RBP8.35□□□□□ -1.07
CCDC171-203ENST00000449575 TRBV2A0A0J9YWF9 115 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 RNF222A6NCQ9 220 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 LYNX1G3V0Z9 82 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 XRCC2O43543 280 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 LYNX1P0DP58 116 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 GSK3AP49840 483 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 PPT1P50897 306 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 DEFB113Q30KQ7 82 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 FAM220AQ7Z4H9 259 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 OR51A4Q8NGJ6 313 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 OR14A2Q96R54 314 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 NRIP2Q9BQI9 281 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 SLC25A21Q9BQT8 299 aaPredicted RBP8.34□□□□□ -1.07
CCDC171-203ENST00000449575 WDR13Q9H1Z4 485 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 TUBA4BQ9H853 241 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 RCC2Q9P258 522 aaKnown RBP8.34□□□□□ -1.07
CCDC171-203ENST00000449575 C17orf100A8MU93 164 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 IQCF6A8MYZ5 107 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 AP4M1O00189 453 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 CLN5O75503 358 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 IGHV1-46P01743 117 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 IGHV2-5P01817 119 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 CA6P23280 308 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 UBE2MP61081 183 aaKnown RBP8.34□□□□□ -1.07
CCDC171-203ENST00000449575 AARDQ4LEZ3 155 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 LY6G6FQ5SQ64 297 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 CLEC2AQ6UVW9 174 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 COMMD2Q86X83 199 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 PIGTQ969N2 578 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 ZNF701Q9NV72 531 aaPredicted RBP8.34□□□□□ -1.07
CCDC171-203ENST00000449575 SVEP1Q4LDE5 3571 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 CR1P17927 2039 aa8.34□□□□□ -1.07
CCDC171-203ENST00000449575 A0A0U1RQV5 110 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR4C45A6NMZ5 311 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF705EA8MWA4 302 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 XRCC3O43542 346 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 ZFPL1O95159 310 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 CD2P06729 351 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 TACSTD2P09758 323 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR4E1P0C645 316 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 NFYBP25208 207 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 SELENOVP59797 346 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 HOXA4Q00056 320 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR8B8Q15620 311 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 TMEM244Q5VVB8 128 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 C1orf174Q8IYL3 243 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR8G5Q8NG78 346 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 HIST1H2BAQ96A08 127 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OCSTAMPQ9BR26 566 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 TOLLIPQ9H0E2 274 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 NOX4Q9NPH5 578 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR5V1Q9UGF6 321 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 RHBDD3Q9Y3P4 386 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 METTL21EPA6NDL7 271 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 GTF2F2P13984 249 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 FAHP16930 419 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 PPOXP50336 477 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 ATP5J2P56134 94 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 RPS11P62280 158 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 ALKBH1Q13686 389 aaKnown RBP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 PNLIPRP3Q17RR3 467 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 LBHQ53QV2 105 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR10K2Q6IF99 312 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 FDX2Q6P4F2 183 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR2Z1Q8NG97 314 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR51S1Q8NGJ8 323 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 RGP1Q92546 391 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 SAT2Q96F10 170 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 FGF23Q9GZV9 251 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 POMT1Q9Y6A1 747 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 F8VVB4 439 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 F8VWA3 439 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms