RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 Q8N402 240 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 FGFRL1Q8N441 504 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 OR52I2Q8NH67 350 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 MRPL30Q8TCC3 161 aaKnown RBP11.66□□□□□ -0.54
SHMT2-203ENST00000449049 FCAMRQ8WWV6 532 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 NCOR1P1Q9H4R4 102 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 NARFLQ9H6Q4 476 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 PCDHB10Q9UN67 800 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 TMEM30CPA0ZSE6 113 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 ANKRD34BA5PLL1 514 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 POM121CA8CG34 1229 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 H7C1Q1 480 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 IGHV2-5P01817 119 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 MT-ND4P03905 459 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 MRPS15P82914 257 aaKnown RBP11.66□□□□□ -0.54
SHMT2-203ENST00000449049 AESQ08117 197 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 Q5PR19 223 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 Q6ZPA2 131 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 GDPD3Q7L5L3 318 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 CLDND2Q8NHS1 167 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 CAPSLQ8WWF8 208 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 CCDC32Q9BV29 185 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 ANAPC10Q9UM13 185 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 PTPN13Q12923 2485 aa11.66□□□□□ -0.54
SHMT2-203ENST00000449049 FCGR3AP08637 254 aa11.65□□□□□ -0.54
SHMT2-203ENST00000449049 NDUFB7P17568 137 aa11.65□□□□□ -0.54
SHMT2-203ENST00000449049 CBX5P45973 191 aa11.65□□□□□ -0.54
SHMT2-203ENST00000449049 NPY4RP50391 375 aa11.65□□□□□ -0.54
SHMT2-203ENST00000449049 P2RX3P56373 397 aa11.65□□□□□ -0.54
SHMT2-203ENST00000449049 EDDM3AQ14507 147 aa11.65□□□□□ -0.54
SHMT2-203ENST00000449049 RNASE12Q5GAN4 147 aaKnown RBP11.65□□□□□ -0.54
SHMT2-203ENST00000449049 ZNF880Q6PDB4 577 aa11.65□□□□□ -0.54
SHMT2-203ENST00000449049 MTFP1Q9UDX5 166 aa11.65□□□□□ -0.54
SHMT2-203ENST00000449049 IGHV4-61A0A0C4DH41 118 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 GPR37O15354 613 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 GLIPR1P48060 266 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 SEC61A1P61619 476 aaKnown RBP11.65□□□□□ -0.55
SHMT2-203ENST00000449049 LMO4P61968 165 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 SSBP1Q04837 148 aaKnown RBP11.65□□□□□ -0.55
SHMT2-203ENST00000449049 BAK1Q16611 211 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 TRIM63Q969Q1 353 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 FOXC2Q99958 501 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 THAP7Q9BT49 309 aaPredicted RBP11.65□□□□□ -0.55
SHMT2-203ENST00000449049 CHMP1AQ9HD42 196 aaPredicted RBP11.65□□□□□ -0.55
SHMT2-203ENST00000449049 ABCB10Q9NRK6 738 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 ING3Q9NXR8 418 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 KIF25Q9UIL4 384 aa11.65□□□□□ -0.55
SHMT2-203ENST00000449049 NBPF19A0A087WUL8 3843 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 ODAMA1E959 279 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 MEIS3P1A6NDR6 274 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 PTTG1O95997 202 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 SRSF7Q16629 238 aaKnown RBP eCLIP11.64□□□□□ -0.55
SHMT2-203ENST00000449049 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-203ENST00000449049 TPRX1Q8N7U7 411 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 POC5Q8NA72 575 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 OR4K15Q8NH41 348 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 MBNL3Q9NUK0 354 aaKnown RBP11.64□□□□□ -0.55
SHMT2-203ENST00000449049 KLK11Q9UBX7 282 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 CLN8Q9UBY8 286 aa11.64□□□□□ -0.55
SHMT2-203ENST00000449049 MEIKINA0A087WXM9 373 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 LANCL1O43813 399 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 RBBP9O75884 186 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 NKX2-5P52952 324 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-203ENST00000449049 EDDM3BP56851 147 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 STEAP3Q658P3 488 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 Q6ZS49 121 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 MOB1BQ7L9L4 216 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 HOGA1Q86XE5 327 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 GVQW1Q8N7I0 195 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 RAB39BQ96DA2 213 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 Q9N2K0 584 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-203ENST00000449049 TMA7Q9Y2S6 64 aaKnown RBP11.63□□□□□ -0.55
SHMT2-203ENST00000449049 A0A096LNT2 108 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 FAM172BPA6NC97 362 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 ORC5O43913 435 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 IL7P13232 177 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 APCP25054 2843 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 GDNFP39905 211 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 ACTBP60709 375 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 GNB2P62879 340 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 ACTG1P63261 375 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 ESCO2Q56NI9 601 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 TCF23Q7RTU1 214 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 DCTN5Q9BTE1 182 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 SSBP3Q9BWW4 388 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-203ENST00000449049 IFT46Q9NQC8 304 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 TRAPPC2LQ9UL33 140 aa11.63□□□□□ -0.55
SHMT2-203ENST00000449049 TRBV23-1A0A0A0MS06 115 aa11.62□□□□□ -0.55
SHMT2-203ENST00000449049 A8MXK9 166 aa11.62□□□□□ -0.55
SHMT2-203ENST00000449049 SPNP16150 400 aa11.62□□□□□ -0.55
SHMT2-203ENST00000449049 MEF2CQ06413 473 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-203ENST00000449049 SETD6Q8TBK2 473 aa11.62□□□□□ -0.55
SHMT2-203ENST00000449049 CCDC107Q8WV48 283 aa11.62□□□□□ -0.55
SHMT2-203ENST00000449049 SNAPC3Q92966 411 aa11.62□□□□□ -0.55
SHMT2-203ENST00000449049 ST6GALNAC5Q9BVH7 336 aa11.62□□□□□ -0.55
SHMT2-203ENST00000449049 C19orf12Q9NSK7 152 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms