RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IL13RA2Q14627 380 aa22.42■■□□□ 1.18
CBX4-202ENST00000448310 RSU1Q15404 277 aa22.42■■□□□ 1.18
CBX4-202ENST00000448310 ZNF529Q6P280 563 aa22.42■■□□□ 1.18
CBX4-202ENST00000448310 THNSL2Q86YJ6 484 aa22.42■■□□□ 1.18
CBX4-202ENST00000448310 Q96MT0 163 aa22.42■■□□□ 1.18
CBX4-202ENST00000448310 NOL4LQ96MY1 436 aaPredicted RBP22.42■■□□□ 1.18
CBX4-202ENST00000448310 PCDHB16Q9NRJ7 776 aa22.42■■□□□ 1.18
CBX4-202ENST00000448310 A0A1W2PPE3 182 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 MAGEB3O15480 346 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 HTR3BO95264 441 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 CLIC3O95833 236 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 RPSAP08865 295 aaKnown RBP22.41■■□□□ 1.18
CBX4-202ENST00000448310 RAB40BQ12829 278 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 MRPL28Q13084 256 aaKnown RBP22.41■■□□□ 1.18
CBX4-202ENST00000448310 HNF4GQ14541 408 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 ZFP1Q6P2D0 407 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 SLC29A1Q99808 456 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 JAM3Q9BX67 310 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 NCOR1P1Q9H4R4 102 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 LINC00574Q9H8X3 128 aa22.41■■□□□ 1.18
CBX4-202ENST00000448310 WI2-2373I1.2A0A1W2PRP0 233 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 NPIPB11E5RHQ5 1161 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 MPZL2O60487 215 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 CDRT1O95170 752 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 TMEM11P17152 192 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 HOXD3P31249 432 aaPredicted RBP22.4■■□□□ 1.18
CBX4-202ENST00000448310 MADCAM1Q13477 382 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 ETV3LQ6ZN32 361 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 C5orf56Q8N8D9 126 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 LINC00482Q8N8I6 264 aa22.4■■□□□ 1.18
CBX4-202ENST00000448310 CPNE2Q96FN4 548 aaPredicted RBP22.4■■□□□ 1.18
CBX4-202ENST00000448310 XAF1Q6GPH4 301 aa22.39■■□□□ 1.17
CBX4-202ENST00000448310 C18orf65Q6ZTR6 163 aa22.39■■□□□ 1.17
CBX4-202ENST00000448310 APH1BQ8WW43 257 aa22.39■■□□□ 1.17
CBX4-202ENST00000448310 LINC00527Q9UJ94 153 aa22.39■■□□□ 1.17
CBX4-202ENST00000448310 DNAH9Q9NYC9 4486 aa22.39■■□□□ 1.17
CBX4-202ENST00000448310 COL7A1Q02388 2944 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 IGKV1D-33P01593 117 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 IGKV1-33P01594 117 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 LIMS3P0CW19 117 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 LIMS4P0CW20 117 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 MRPL41Q8IXM3 137 aaKnown RBP22.38■■□□□ 1.17
CBX4-202ENST00000448310 SUMF2Q8NBJ7 301 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 Q8NFD4 153 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 HAVCR2Q8TDQ0 301 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 C9orf16Q9BUW7 83 aa22.38■■□□□ 1.17
CBX4-202ENST00000448310 DPCDQ9BVM2 203 aaPredicted RBP22.38■■□□□ 1.17
CBX4-202ENST00000448310 RPL36Q9Y3U8 105 aaKnown RBP22.38■■□□□ 1.17
CBX4-202ENST00000448310 LOC100130705A0A1B0GUX0 176 aa22.37■■□□□ 1.17
CBX4-202ENST00000448310 DUS4LO95620 317 aaKnown RBP22.37■■□□□ 1.17
CBX4-202ENST00000448310 RAB7AP51149 207 aa22.37■■□□□ 1.17
CBX4-202ENST00000448310 PAX5Q02548 391 aa22.37■■□□□ 1.17
CBX4-202ENST00000448310 DEFB121Q5J5C9 76 aa22.37■■□□□ 1.17
CBX4-202ENST00000448310 ASCL4Q6XD76 172 aa22.37■■□□□ 1.17
CBX4-202ENST00000448310 OR10X1Q8NGY0 326 aa22.37■■□□□ 1.17
CBX4-202ENST00000448310 MRPS18AQ9NVS2 196 aaKnown RBP22.37■■□□□ 1.17
CBX4-202ENST00000448310 ING4Q9UNL4 249 aa22.37■■□□□ 1.17
CBX4-202ENST00000448310 ST3GAL6Q9Y274 331 aa22.37■■□□□ 1.17
CBX4-202ENST00000448310 KCNJ3P48549 501 aa22.36■■□□□ 1.17
CBX4-202ENST00000448310 RPL23AP62750 156 aaKnown RBP22.36■■□□□ 1.17
CBX4-202ENST00000448310 SMN1Q16637 294 aaKnown RBP22.36■■□□□ 1.17
CBX4-202ENST00000448310 OR8H3Q8N146 312 aa22.36■■□□□ 1.17
CBX4-202ENST00000448310 UBALD1Q8TB05 177 aa22.36■■□□□ 1.17
CBX4-202ENST00000448310 GPR148Q8TDV2 347 aa22.36■■□□□ 1.17
CBX4-202ENST00000448310 FAM118AQ9NWS6 357 aa22.36■■□□□ 1.17
CBX4-202ENST00000448310 SERPINE3A8MV23 424 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 OR7C1O76099 320 aaPredicted RBP22.35■■□□□ 1.17
CBX4-202ENST00000448310 REG1BP48304 166 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 KLHL22Q53GT1 634 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 C8orf86Q6ZUL3 223 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 OR2W3Q7Z3T1 314 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 OR10A7Q8NGE5 316 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 CHPT1Q8WUD6 406 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 TMEM106AQ96A25 262 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 ORAI1Q96D31 301 aa22.35■■□□□ 1.17
CBX4-202ENST00000448310 IGHV3-72A0A0B4J1Y9 119 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 HSD17B6O14756 317 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 FGF16O43320 207 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 CD2P06729 351 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 THBS3P49746 956 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 RBM11P57052 281 aaKnown RBP22.34■■□□□ 1.17
CBX4-202ENST00000448310 EGFEM1PQ0D2K5 195 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 DDI2Q5TDH0 399 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 OR2G6Q5TZ20 316 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 FAM53AQ6NSI3 398 aaPredicted RBP22.34■■□□□ 1.17
CBX4-202ENST00000448310 C11orf87Q6NUJ2 197 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 OR51D1Q8NGF3 324 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 METTL9Q9H1A3 318 aa22.34■■□□□ 1.17
CBX4-202ENST00000448310 NUDT19A8MXV4 375 aa22.33■■□□□ 1.17
CBX4-202ENST00000448310 GEMIN2O14893 280 aaKnown RBP22.33■■□□□ 1.17
CBX4-202ENST00000448310 SERPINA2P20848 420 aa22.33■■□□□ 1.17
CBX4-202ENST00000448310 ETV1P50549 477 aa22.33■■□□□ 1.17
CBX4-202ENST00000448310 RPL22L1Q6P5R6 122 aaKnown RBP22.33■■□□□ 1.17
CBX4-202ENST00000448310 SLC16A12Q6ZSM3 486 aa22.33■■□□□ 1.17
CBX4-202ENST00000448310 SLC35E3Q7Z769 313 aa22.33■■□□□ 1.17
CBX4-202ENST00000448310 MOB3BQ86TA1 216 aa22.33■■□□□ 1.17
CBX4-202ENST00000448310 OR52N1Q8NH53 320 aa22.33■■□□□ 1.17
CBX4-202ENST00000448310 FGF20Q9NP95 211 aaPredicted RBP22.33■■□□□ 1.17
CBX4-202ENST00000448310 SIRT4Q9Y6E7 314 aaPredicted RBP22.33■■□□□ 1.17
CBX4-202ENST00000448310 LINC01548A6NM66 108 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms