RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TBC1D29Q9UFV1 150 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 C3orf85A0A1B0GTC6 90 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 H0YL77 283 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 RELBQ01201 579 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 EDDM3AQ14507 147 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 DMRTC1Q5HYR2 192 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 OR11H4Q8NGC9 324 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 MRPL37Q9BZE1 423 aaKnown RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 KCND3Q9UK17 655 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 PCOLCE2Q9UKZ9 415 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 PSG11Q9UQ72 335 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 CARHSP1Q9Y2V2 147 aaKnown RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 PPIL1Q9Y3C6 166 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 CEP250Q9BV73 2442 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 PLXNA3P51805 1871 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 H3BMH7 237 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 LDLRAD4O15165 306 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 CRXO43186 299 aaPredicted RBP8.15□□□□□ -1.1
SMC6-207ENST00000448223 HBZP02008 142 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 RPL11P62913 178 aaKnown RBP8.15□□□□□ -1.1
SMC6-207ENST00000448223 TMEM176BQ3YBM2 270 aaPredicted RBP8.15□□□□□ -1.1
SMC6-207ENST00000448223 LHFPL2Q6ZUX7 228 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 GLRX5Q86SX6 157 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 C5orf17Q8NAS9 161 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 OR13C6PQ8NH95 151 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 S1PR3Q99500 378 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 CITED2Q99967 270 aaPredicted RBP8.15□□□□□ -1.1
SMC6-207ENST00000448223 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
SMC6-207ENST00000448223 TPRP12270 2363 aaKnown RBP8.15□□□□□ -1.1
SMC6-207ENST00000448223 A1L4Q6 167 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 P01737 135 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 SNRPCP09234 159 aaKnown RBP8.15□□□□□ -1.1
SMC6-207ENST00000448223 ATP6V0CP27449 155 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 GLIPR1P48060 266 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 MFAP2P55001 183 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 RUNX3Q13761 415 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 SGK494Q96LW2 274 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 RARRES2Q99969 163 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 TMEM70Q9BUB7 260 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 ZFP64Q9NPA5 681 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 PLSCR4Q9NRQ2 329 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 SLCO1C1Q9NYB5 712 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 OR5AC2Q9NZP5 309 aa8.15□□□□□ -1.1
SMC6-207ENST00000448223 A0A1B0GTH9 108 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 A6NNC1 897 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 C4orf47A7E2U8 309 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 HLA-DQA1P01909 254 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 GAPDHP04406 335 aaKnown RBP8.15□□□□□ -1.11
SMC6-207ENST00000448223 ATRAIDQ6UW56 229 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 SHISA6Q6ZSJ9 500 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 SFTPA2Q8IWL1 248 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 OR1N2Q8NGR9 330 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 CDX2Q99626 313 aaPredicted RBP8.15□□□□□ -1.11
SMC6-207ENST00000448223 MCTS1Q9ULC4 181 aaKnown RBP8.15□□□□□ -1.11
SMC6-207ENST00000448223 ENTPD2Q9Y5L3 495 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 UBE2CO00762 179 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 RER1O15258 196 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 CA3P07451 260 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 FGF5P12034 268 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 EWSR1Q01844 656 aaKnown RBP eCLIP8.15□□□□□ -1.11
SMC6-207ENST00000448223 ZNF816Q0VGE8 651 aaPredicted RBP8.15□□□□□ -1.11
SMC6-207ENST00000448223 TGIF1Q15583 401 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 ARIH2OSQ8N7S6 290 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 GTF3AQ92664 365 aaKnown RBP8.15□□□□□ -1.11
SMC6-207ENST00000448223 SLX1AQ9BQ83 275 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 C2orf88Q9BSF0 95 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.11
SMC6-207ENST00000448223 AAMDCQ9H7C9 122 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 PPP1R3EQ9H7J1 279 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 ST3GAL6Q9Y274 331 aa8.15□□□□□ -1.11
SMC6-207ENST00000448223 F11RQ9Y624 299 aaKnown RBP8.15□□□□□ -1.11
SMC6-207ENST00000448223 DOCK9Q9BZ29 2069 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 CD74P04233 296 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 NTSR1P30989 418 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 KIR2DS3Q14952 304 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 SHISA5Q8N114 240 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 OR52N5Q8NH56 324 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 SDF2Q99470 211 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 PBOV1Q9GZY1 135 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.14□□□□□ -1.11
SMC6-207ENST00000448223 A0A1W2PRS3 328 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 MRPL33O75394 65 aaKnown RBP8.14□□□□□ -1.11
SMC6-207ENST00000448223 SRSF10O75494 262 aaKnown RBP8.14□□□□□ -1.11
SMC6-207ENST00000448223 CYC1P08574 325 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 IL3RAP26951 378 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 FZD5Q13467 585 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 LYSMD4Q5XG99 296 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 ZNF418Q8TF45 676 aaPredicted RBP8.14□□□□□ -1.11
SMC6-207ENST00000448223 PELI1Q96FA3 418 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 APOOQ9BUR5 198 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 CACNG5Q9UF02 275 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 MMACHCQ9Y4U1 282 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 HS3ST3A1Q9Y663 406 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 IGSF23A1L1A6 192 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 C1QTNF9BB2RNN3 333 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 H0YGG7 62 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 GPX4P36969 197 aaPredicted RBP8.14□□□□□ -1.11
SMC6-207ENST00000448223 BTG2P78543 158 aa8.14□□□□□ -1.11
SMC6-207ENST00000448223 C1orf140Q5VVS0 124 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms