RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 C16orf82Q7Z2V1 217 aa16.56■□□□□ 0.24
SDC1-205ENST00000447124 NDUFA11Q86Y39 141 aa16.56■□□□□ 0.24
SDC1-205ENST00000447124 PACRGLQ8N7B6 248 aa16.56■□□□□ 0.24
SDC1-205ENST00000447124 OR52N1Q8NH53 320 aa16.56■□□□□ 0.24
SDC1-205ENST00000447124 MRGPRDQ8TDS7 321 aa16.56■□□□□ 0.24
SDC1-205ENST00000447124 PGLYRP3Q96LB9 341 aa16.56■□□□□ 0.24
SDC1-205ENST00000447124 RBM14Q96PK6 669 aaKnown RBP16.56■□□□□ 0.24
SDC1-205ENST00000447124 SLC25A33Q9BSK2 321 aa16.56■□□□□ 0.24
SDC1-205ENST00000447124 DPCDQ9BVM2 203 aaPredicted RBP16.56■□□□□ 0.24
SDC1-205ENST00000447124 IL36GQ9NZH8 169 aa16.56■□□□□ 0.24
SDC1-205ENST00000447124 A0A1W2PP11 408 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A18PA6NE21 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A16PA6NEW6 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A20PA6NIJ5 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A9PA6NNJ1 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A12PA8MX19 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A5PA8MXJ8 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 H3BUI4 141 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 J3QR06 171 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 IL1AP01583 271 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A15PP0C7V4 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A13PP0C7W8 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A14PP0C7W9 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 FAM90A24PP0C7X0 464 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 MYL12AP19105 171 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 ST3GAL4Q11206 333 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 DIAPH2-AS1Q14236 149 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 LTC4SQ16873 150 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 ARSJQ5FYB0 599 aaPredicted RBP16.55■□□□□ 0.24
SDC1-205ENST00000447124 NHLRC3Q5JS37 347 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 OSR2Q8N2R0 312 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 CREB3L1Q96BA8 519 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 IFT22Q9H7X7 185 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 PSG11Q9UQ72 335 aa16.55■□□□□ 0.24
SDC1-205ENST00000447124 TRAV8-7A0A075B6U6 113 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 GEMIN2O14893 280 aaKnown RBP16.54■□□□□ 0.24
SDC1-205ENST00000447124 PEX14O75381 377 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 OR2F2O95006 317 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 GNAO1P09471 354 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 CEACAM3P40198 252 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 KCNJ3P48549 501 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 RBM11P57052 281 aaKnown RBP16.54■□□□□ 0.24
SDC1-205ENST00000447124 PPP3R1P63098 170 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 CD83Q01151 205 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 RCN1Q15293 331 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 ABCA11PQ4W5N1 156 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 TCTEX1D4Q5JR98 221 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 SETD9Q8NE22 299 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 OR5AU1Q8NGC0 362 aa16.54■□□□□ 0.24
SDC1-205ENST00000447124 TRBV5-7A0A0A0MS05 114 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 A0A1W2PPK0 400 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 OOSP1A8MZH6 123 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 XPNPEP2O43895 674 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 OR7C1O76099 320 aaPredicted RBP16.53■□□□□ 0.24
SDC1-205ENST00000447124 LPLP06858 475 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 SERPINA2P20848 420 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 SSTR5P35346 364 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 RIPK1Q13546 671 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 Q499Y3 187 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 KPRPQ5T749 579 aaPredicted RBP16.53■□□□□ 0.24
SDC1-205ENST00000447124 CAPSLQ8WWF8 208 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 R3HDM4Q96D70 268 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 ZNF184Q99676 751 aaPredicted RBP16.53■□□□□ 0.24
SDC1-205ENST00000447124 C8orf4Q9NR00 106 aa16.53■□□□□ 0.24
SDC1-205ENST00000447124 CHCHD3Q9NX63 227 aaKnown RBP16.53■□□□□ 0.24
SDC1-205ENST00000447124 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.53■□□□□ 0.24
SDC1-205ENST00000447124 A0A1W2PPE3 182 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 PIN1P1O15428 100 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 YIF1BQ5BJH7 314 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 FAM53AQ6NSI3 398 aaPredicted RBP16.52■□□□□ 0.24
SDC1-205ENST00000447124 C10orf99Q6UWK7 81 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 CENPVQ7Z7K6 275 aaPredicted RBP16.52■□□□□ 0.24
SDC1-205ENST00000447124 THNSL2Q86YJ6 484 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 FBLIM1Q8WUP2 373 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 RPEQ96AT9 228 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 PSORS1C1Q9UIG5 152 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 HSPE1-MOB4S4R3N1 261 aa16.52■□□□□ 0.24
SDC1-205ENST00000447124 A0A1W2PPI3 338 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 C15orf65H3BRN8 121 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 PRB2P02812 416 aaPredicted RBP16.51■□□□□ 0.23
SDC1-205ENST00000447124 CSTBP04080 98 aaKnown RBP16.51■□□□□ 0.23
SDC1-205ENST00000447124 CAPGP40121 348 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 MNDAP41218 407 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 ARHGDIBP52566 201 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 SLC22A6Q4U2R8 563 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 OXLD1Q5BKU9 147 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 OGFRL1Q5TC84 451 aaPredicted RBP16.51■□□□□ 0.23
SDC1-205ENST00000447124 CCDC144NLQ6NUI1 221 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 LYPD6Q86Y78 171 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 DRAM1Q8N682 238 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 OR10A7Q8NGE5 316 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 AKR1E2Q96JD6 320 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 OR14A2Q96R54 314 aa16.51■□□□□ 0.23
SDC1-205ENST00000447124 PNMA8CA0A1B0GUJ8 204 aa16.5■□□□□ 0.23
SDC1-205ENST00000447124 EFCAB10A6NFE3 127 aa16.5■□□□□ 0.23
SDC1-205ENST00000447124 MT-ND4P03905 459 aa16.5■□□□□ 0.23
SDC1-205ENST00000447124 SNRNP70P08621 437 aaKnown RBP16.5■□□□□ 0.23
SDC1-205ENST00000447124 GZMHP20718 246 aa16.5■□□□□ 0.23
SDC1-205ENST00000447124 GNG10P50151 68 aa16.5■□□□□ 0.23
SDC1-205ENST00000447124 MED21Q13503 144 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms