RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 ODF4Q2M2E3 257 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 C17orf58Q2M2W7 97 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 CXorf66Q5JRM2 361 aaPredicted RBP4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 FAM27D1Q5T7N8 215 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 PGAM4Q8N0Y7 254 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 OR4D6Q8NGJ1 314 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 GIPC3Q8TF64 312 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 C4orf3Q8WVX3 66 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 LEAP2Q969E1 77 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 RNFT2Q96EX2 444 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 BORCS8Q96FH0 119 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 CNN2Q99439 309 aaKnown RBP4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 GON7Q9BXV9 100 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 MAGIXQ9H6Y5 334 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 EDA2RQ9HAV5 297 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 PLEKHA1Q9HB21 404 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 EXOSC4Q9NPD3 245 aaKnown RBP4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 ACTR3BQ9P1U1 418 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 AMMECR1Q9Y4X0 333 aaPredicted RBP4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 SNX5Q9Y5X3 404 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 R4GMQ9 66 aa4.52□□□□□ -1.69
HMGN1P36-201ENST00000446623 KBTBD11-OT1A0A1B0GTJ5 212 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 ZNF729A6NN14 1252 aaPredicted RBP4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 J3QR06 171 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 SH2D1BO14796 132 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 SYT7O43581 403 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 RPP14O95059 124 aaKnown RBP4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 OR2H2O95918 312 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 CYB5AP00167 134 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 SERPINA3P01011 423 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 IGKV1D-33P01593 117 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 IGKV1-33P01594 117 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 IGHV3-7P01780 117 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 IGHG4P01861 327 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 ELANEP08246 267 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 OSMP13725 252 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 POU3F4P49335 361 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 RBP2P50120 134 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 RAB7AP51149 207 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 INSL3P51460 131 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 ATP1B3P54709 279 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 SCAND1P57086 179 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 CXCR4P61073 352 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 ACTR3P61158 418 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 CDK5Q00535 292 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 CFHR3Q02985 330 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 SCN1BQ07699 218 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 MADCAM1Q13477 382 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 ATXN7L3Q14CW9 347 aaPredicted RBP4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 KRBOX4Q5JUW0 171 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 ASPHD1Q5U4P2 390 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 TMEM236Q5W0B7 351 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 TMEM179BQ7Z7N9 219 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 TGIF2LXQ8IUE1 241 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 SLC35F2Q8IXU6 374 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 DEFB107AQ8IZN7 70 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 Q8N6K4 173 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 OR11H1Q8NG94 326 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 ISOC1Q96CN7 298 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 COQ2Q96H96 371 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 TM2D3Q9BRN9 247 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 CHST5Q9GZS9 411 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 ABCG5Q9H222 651 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 HMG20AQ9NP66 347 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 MRM2Q9UI43 246 aaKnown RBP4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 PSG11Q9UQ72 335 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 GSTK1Q9Y2Q3 226 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 TMA7Q9Y2S6 64 aaKnown RBP4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 TNCP24821 2201 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
HMGN1P36-201ENST00000446623 IGKV1-9A0A0C4DH69 117 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 IGKV1-12A0A0C4DH73 117 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 TRIM64CA6NLI5 447 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 NCBP2LA6PVI3 153 aaKnown RBP4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 ZNF670-ZNF695F2Z2N8 137 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 SLC33A1O00400 549 aaPredicted RBP4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 RRP9O43818 475 aaKnown RBP4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 IGKV1D-12P01611 117 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 CSN2P05814 226 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 OR8U8P0C7N1 319 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 CGB3P0DN86 165 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 CGB7P0DN87 165 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 GYPEP15421 78 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 ZNF44P15621 663 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 SPNP16150 400 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 PSMB8P28062 276 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 MTCP1P56278 107 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 PDZK1IP1Q13113 114 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 EBI3Q14213 229 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 GK3PQ14409 553 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 FAM98BQ52LJ0 330 aaKnown RBP4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 Q6P435 159 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 C16orf89Q6UX73 402 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 LHFPL2Q6ZUX7 228 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 ZNF429Q86V71 674 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 CATSPERDQ86XM0 798 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 OR8H3Q8N146 312 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 YIPF7Q8N8F6 280 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 DNAAF1Q8NEP3 725 aa4.5□□□□□ -1.69
HMGN1P36-201ENST00000446623 OR1N2Q8NGR9 330 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms