RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 ABCA11PQ4W5N1 156 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 TMEM123Q8N131 208 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 LGI3Q8N145 548 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 GPR137CQ8N3F9 429 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 OR5D18Q8NGL1 313 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 MAFAQ8NHW3 353 aaPredicted RBP16.34■□□□□ 0.21
PMPCB-204ENST00000444457 TMEM171Q8WVE6 324 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 A0A0U1RQV5 110 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 MSTNO14793 375 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 DHHO43323 396 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 DHRS3O75911 302 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 HBE1P02100 147 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 MBP02144 154 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 TSPO2Q5TGU0 170 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 WDR5BQ86VZ2 330 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 OR10A7Q8NGE5 316 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 NPRL2Q8WTW4 380 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 HAS2Q92819 552 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 TOMM40LQ969M1 308 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 TK1P04183 234 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 ZFP36L1Q07352 338 aaKnown RBP16.33■□□□□ 0.2
PMPCB-204ENST00000444457 SLC25A26Q70HW3 274 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 C6orf201Q7Z4U5 140 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 OR2Y1Q8NGV0 311 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 SYT3Q9BQG1 590 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 CABLES2Q9BTV7 478 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 RBM24Q9BX46 236 aaKnown RBP16.33■□□□□ 0.2
PMPCB-204ENST00000444457 SRD5A3Q9H8P0 318 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 V9GYS6 101 aa16.33■□□□□ 0.2
PMPCB-204ENST00000444457 TMEM225BP0DP42 221 aa16.32■□□□□ 0.2
PMPCB-204ENST00000444457 HIST1H3AP68431 136 aa16.32■□□□□ 0.2
PMPCB-204ENST00000444457 TLE4Q04727 773 aa16.32■□□□□ 0.2
PMPCB-204ENST00000444457 TRA2AQ13595 282 aaKnown RBP eCLIP16.32■□□□□ 0.2
PMPCB-204ENST00000444457 RSPO1Q2MKA7 263 aaPredicted RBP16.32■□□□□ 0.2
PMPCB-204ENST00000444457 DTX1Q86Y01 620 aa16.32■□□□□ 0.2
PMPCB-204ENST00000444457 UBALD2Q8IYN6 164 aa16.32■□□□□ 0.2
PMPCB-204ENST00000444457 GNPNAT1Q96EK6 184 aaPredicted RBP16.32■□□□□ 0.2
PMPCB-204ENST00000444457 HDHD3Q9BSH5 251 aaPredicted RBP16.32■□□□□ 0.2
PMPCB-204ENST00000444457 VPS13AQ96RL7 3174 aa16.32■□□□□ 0.2
PMPCB-204ENST00000444457 FAHP16930 419 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 OTX1P32242 354 aaPredicted RBP16.31■□□□□ 0.2
PMPCB-204ENST00000444457 COL10A1Q03692 680 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 DPPA3Q6W0C5 159 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 RPS19BP1Q86WX3 136 aaKnown RBP16.31■□□□□ 0.2
PMPCB-204ENST00000444457 CALHM2Q9HA72 323 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 SLC2A9Q9NRM0 540 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 SLC7A11Q9UPY5 501 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 A0A0J9YW62 118 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 PATE3B3GLJ2 98 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 STMND1H3BQB6 276 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 M0R143 59 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 TNFSF11O14788 317 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 CEACAM1P13688 526 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 TDGF1P3P51864 188 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 MLF1P58340 268 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 ZIC4Q8N9L1 334 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 NECAP2Q9NVZ3 263 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 VAX2Q9UIW0 290 aa16.31■□□□□ 0.2
PMPCB-204ENST00000444457 M0R135 149 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 ZNF25P17030 456 aaPredicted RBP16.3■□□□□ 0.2
PMPCB-204ENST00000444457 MDKP21741 143 aaPredicted RBP16.3■□□□□ 0.2
PMPCB-204ENST00000444457 RAC1P63000 192 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 MAML2Q8IZL2 1156 aaPredicted RBP16.3■□□□□ 0.2
PMPCB-204ENST00000444457 PP6455Q8WZ26 134 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 ZNF799Q96GE5 643 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 ULBP2Q9BZM5 246 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 CTDSP1Q9GZU7 261 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 PLEKHF2Q9H8W4 249 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 SDF2L1Q9HCN8 221 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 CNTRLQ7Z7A1 2325 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 TRAV1-1A0A0B4J248 108 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 TDGF1P13385 188 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 PDLIM4P50479 330 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 RAB11AP62491 216 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 ZNF880Q6PDB4 577 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 Q6ZSR3 168 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 P4HA3Q7Z4N8 544 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 SLC35G3Q8N808 338 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 OR5L1Q8NGL2 311 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 SRXN1Q9BYN0 137 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 LYRM2Q9NU23 88 aaPredicted RBP16.3■□□□□ 0.2
PMPCB-204ENST00000444457 PLEK2Q9NYT0 353 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 PIGLQ9Y2B2 252 aa16.3■□□□□ 0.2
PMPCB-204ENST00000444457 CBR3O75828 277 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 CRYABP02511 175 aaKnown RBP16.29■□□□□ 0.2
PMPCB-204ENST00000444457 PHLDA2Q53GA4 152 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 ZNF468Q5VIY5 522 aaPredicted RBP16.29■□□□□ 0.2
PMPCB-204ENST00000444457 CMTM1Q8IZ96 169 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 PLEKHJ1Q9NW61 149 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 CDS2O95674 445 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 FCGR2AP12318 317 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 FOLR3P41439 243 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 DUSP3P51452 185 aaPredicted RBP16.29■□□□□ 0.2
PMPCB-204ENST00000444457 C21orf62-AS1Q17RA5 79 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 TMEM252Q8N6L7 170 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 OR5C1Q8NGR4 320 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 ZNF837Q96EG3 531 aaPredicted RBP16.29■□□□□ 0.2
PMPCB-204ENST00000444457 HIST1H2AAQ96QV6 131 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 PYGO2Q9BRQ0 406 aa16.29■□□□□ 0.2
PMPCB-204ENST00000444457 GLRX2Q9NS18 164 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms