RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 ELF5Q9UKW6 265 aaPredicted RBP11.19□□□□□ -0.62
TM9SF4-204ENST00000442842 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
TM9SF4-204ENST00000442842 KCNS2Q9ULS6 477 aa11.19□□□□□ -0.62
TM9SF4-204ENST00000442842 MRPS7Q9Y2R9 242 aaKnown RBP11.19□□□□□ -0.62
TM9SF4-204ENST00000442842 CELSR1Q9NYQ6 3014 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 ARID1AO14497 2285 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 A0A0A6YYH2 397 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 A0A1W2PPH5 198 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 A6NJ64 397 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 CD5LO43866 347 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 PTHLHP12272 177 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 TALDO1P37837 337 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 ARF6P62330 175 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 PAX2Q02962 417 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 MEF2CQ06413 473 aaPredicted RBP11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 KRTAP1-1Q07627 177 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 ZNF260Q3ZCT1 412 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 TMEM200BQ69YZ2 307 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 PRR18Q8N4B5 295 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 UBALD1Q8TB05 177 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 NUDCD2Q8WVJ2 157 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 GCDHQ92947 438 aaPredicted RBP11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 CMTM3Q96MX0 182 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 ZNF714Q96N38 554 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 OR6C3Q9NZP0 311 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 KCNK7Q9Y2U2 307 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 POLR3KQ9Y2Y1 108 aaPredicted RBP11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 INSIG2Q9Y5U4 225 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 LINC00312Q9Y6C7 94 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 NOTCH2Q04721 2471 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 CCDC168Q8NDH2 2452 aa11.18□□□□□ -0.62
TM9SF4-204ENST00000442842 SERPINE3A8MV23 424 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 XRCC3O43542 346 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 CA11O75493 328 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 MT-ND4P03905 459 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 GSTP1P09211 210 aaKnown RBP11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 S100A5P33763 92 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 SSTR5P35346 364 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 PRB3Q04118 309 aaPredicted RBP11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 ARL6IP1Q15041 203 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 LTC4SQ16873 150 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 RNASE12Q5GAN4 147 aaKnown RBP11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 PRAMEF5Q5TYX0 476 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 METTL11BQ5VVY1 283 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 CLEC9AQ6UXN8 241 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 SNX29P2Q8IUI4 249 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 MAFIPQ8WZ33 124 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 DACT3Q96B18 629 aaPredicted RBP11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 DIRAS2Q96HU8 199 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 PCGF1Q9BSM1 259 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 MMP27Q9H306 513 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 GAL3ST2Q9H3Q3 398 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 YAE1D1Q9NRH1 226 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 ITPR3Q14573 2671 aa11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 MAP1AP78559 2803 aaPredicted RBP11.17□□□□□ -0.62
TM9SF4-204ENST00000442842 CR1P17927 2039 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 KIR2DS1A0A191URI9 304 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 MEIS3P1A6NDR6 274 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 OMGP23515 440 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 DLX1P56177 255 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 ERVFRD-1P60508 538 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 PAX5Q02548 391 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 GUCA2AQ02747 115 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 C11orf91Q3C1V1 193 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 C6orf183Q5T699 404 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 HACD4Q5VWC8 232 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 ZNF782Q6ZMW2 699 aaPredicted RBP11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 VMO1Q7Z5L0 202 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 KIR3DL3Q8N743 410 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 C7orf69Q9H7B7 122 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 AUNIPQ9H7T9 357 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 SIRT7Q9NRC8 400 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 CALYQ9NYX4 217 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 UBE2J1Q9Y385 318 aaPredicted RBP11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 AUP1Q9Y679 476 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 A3GALT2U3KPV4 340 aa11.16□□□□□ -0.62
TM9SF4-204ENST00000442842 CLPXO76031 633 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 TOX4O94842 621 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 LY6G6DO95868 133 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 NAPSAO96009 420 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 FCER2P06734 321 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 FCGR3AP08637 254 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 ZNF728P0DKX0 622 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 FOSL1P15407 271 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 RCC1P18754 421 aaPredicted RBP11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 GATA3P23771 443 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 IL18Q14116 193 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 PNLIPRP3Q17RR3 467 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 Q6ZPA2 131 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 IL17RELQ6ZVW7 336 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 GAPTQ8N292 157 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 ZNF565Q8N9K5 539 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 WDFY2Q96P53 400 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 TMPRSS13Q9BYE2 586 aa11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 RIMS4Q9H426 269 aaPredicted RBP11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 GSX1Q9H4S2 264 aaPredicted RBP11.15□□□□□ -0.62
TM9SF4-204ENST00000442842 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms