RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 A0A1W2PRF3 423 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 A0A1W2PRM7 423 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 PAHP00439 452 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 IGHV1-69P01742 117 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 GDNFP39905 211 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 KCNJ3P48549 501 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 CTF1Q16619 201 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 C17orf58Q2M2W7 97 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 SLC35E4Q6ICL7 350 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
USP39-205ENST00000442708 ZNF497Q6ZNH5 498 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 C6orf201Q7Z4U5 140 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 TRAPPC6BQ86SZ2 158 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 TEX29Q8N6K0 151 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 SLC6A7Q99884 636 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 BARHL1Q9BZE3 327 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 NCOR1P1Q9H4R4 102 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 SPACA1Q9HBV2 294 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 RAB22AQ9UL26 194 aa13.1□□□□□ -0.31
USP39-205ENST00000442708 TRGV10A0A0A0MS01 117 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 FUOMA2VDF0 154 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 MCRIP1C9JLW8 97 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 GABARAPO95166 117 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 MT-ND4P03905 459 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 BLVRBP30043 206 aaPredicted RBP13.09□□□□□ -0.31
USP39-205ENST00000442708 VEGFCP49767 419 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 TMEM50BP56557 158 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 BLMHQ13867 455 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 MOGAT2Q3SYC2 334 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 NKAPLQ5M9Q1 402 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 UTF1Q5T230 341 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 PRAMEF5Q5TYX0 476 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 GPR157Q5UAW9 335 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 GPR141Q7Z602 305 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 NEK7Q8TDX7 302 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 ZNF48Q96MX3 618 aaPredicted RBP13.09□□□□□ -0.31
USP39-205ENST00000442708 FAAP24Q9BTP7 215 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 ETAA1Q9NY74 926 aa13.09□□□□□ -0.31
USP39-205ENST00000442708 FBN3Q75N90 2809 aa13.08□□□□□ -0.31
USP39-205ENST00000442708 MDFIC2A0A1B0GVS7 189 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 A0A1W2PPH5 198 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 TMEM30CPA0ZSE6 113 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 RBP4P02753 201 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 GLAP06280 429 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 IGHV1-8P0DP01 117 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 OMGP23515 440 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 GLP1RP43220 463 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 RPL5P46777 297 aaKnown RBP13.08□□□□□ -0.32
USP39-205ENST00000442708 PLAC9Q5JTB6 97 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 IDNKQ5T6J7 187 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 Q6ZPA2 131 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 C9orf139Q6ZV77 190 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 C5orf24Q7Z6I8 188 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 GAPTQ8N292 157 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 OR5H6Q8NGV6 325 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 LGALS14Q8TCE9 139 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 MRGPRDQ8TDS7 321 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 CCDC107Q8WV48 283 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 NEDD4LQ96PU5 975 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 URM1Q9BTM9 101 aaKnown RBP13.08□□□□□ -0.32
USP39-205ENST00000442708 MS4A7Q9GZW8 240 aaPredicted RBP13.08□□□□□ -0.32
USP39-205ENST00000442708 TAS2R3Q9NYW6 316 aa13.08□□□□□ -0.32
USP39-205ENST00000442708 DNHD1Q96M86 4753 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 IL1AP01583 271 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 RAB6AP20340 208 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 CDK2P24941 298 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 SERPINB10P48595 397 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 SRSF2Q01130 221 aaKnown RBP13.07□□□□□ -0.32
USP39-205ENST00000442708 RBM39Q14498 530 aaKnown RBP13.07□□□□□ -0.32
USP39-205ENST00000442708 OLFML2AQ68BL7 652 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 OR4K15Q8NH41 348 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 NDNFQ8TB73 568 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 AJUBAQ96IF1 538 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 ARHGAP5-AS1Q96IT6 56 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 CALYQ9NYX4 217 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 OR6C3Q9NZP0 311 aa13.07□□□□□ -0.32
USP39-205ENST00000442708 KBTBD11-OT1A0A1B0GTJ5 212 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 ZNF729A6NN14 1252 aaPredicted RBP13.06□□□□□ -0.32
USP39-205ENST00000442708 RAB27BO00194 218 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 NPFFO15130 113 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 CLPXO76031 633 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 RCC1P18754 421 aaPredicted RBP13.06□□□□□ -0.32
USP39-205ENST00000442708 COX7A1P24310 79 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 SSTR5P35346 364 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 UBE2E1P51965 193 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 DEFB112Q30KQ8 113 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 NCR3LG1Q68D85 454 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 HEPN1Q6WQI6 88 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 RFESDQ8TAC1 157 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 UBALD1Q8TB05 177 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 MRPL30Q8TCC3 161 aaKnown RBP13.06□□□□□ -0.32
USP39-205ENST00000442708 C17orf50Q8WW18 174 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 PTX4Q96A99 478 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 SLC25A38Q96DW6 304 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 HDHD3Q9BSH5 251 aaPredicted RBP13.06□□□□□ -0.32
USP39-205ENST00000442708 PECRQ9BY49 303 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 GAL3ST2Q9H3Q3 398 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 OCEL1Q9H607 264 aa13.06□□□□□ -0.32
USP39-205ENST00000442708 LINC00574Q9H8X3 128 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms