RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MS4A6EQ96DS6 147 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ABHD17AQ96GS6 310 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 LPAR4Q99677 370 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 MAGT1Q9H0U3 335 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 OR52D1Q9H346 318 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SMDT1Q9H4I9 107 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZMAT3Q9HA38 289 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 Q9N2K0 584 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZNF319Q9P2F9 582 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 NAT8Q9UHE5 227 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 LOXL2Q9Y4K0 774 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ADGRG4Q8IZF6 3080 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 IGHV1-69-2A0A0G2JMI3 117 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 HELTA6NFD8 242 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 C1QTNF3-AMACRE9PGA6 284 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ERI3O43414 337 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 IFNA1P01562 189 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CSTBP04080 98 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 HLA-DQB2P05538 268 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 FAHP16930 419 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 RHOQP17081 205 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 NTF3P20783 257 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CSRP3P50461 194 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZNF83P51522 516 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 STC1P52823 247 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ATP5J2P56134 94 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 NSDHLQ15738 373 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 MSMO1Q15800 293 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ACKR1Q16570 336 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 DEFB110Q30KQ9 67 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PLPPR5Q32ZL2 321 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 C9orf135Q5VTT2 229 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 FBXW12Q6X9E4 464 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 UEVLDQ8IX04 471 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ATOH7Q8N100 152 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SIRT6Q8N6T7 355 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 C5orf17Q8NAS9 161 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 OR2T10Q8NGZ9 312 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CCL4L1Q8NHW4 92 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 FNDC9Q8TBE3 224 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 GPR146Q96CH1 333 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ALG14Q96F25 216 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 EAF1Q96JC9 268 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 GPA33Q99795 319 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SMIM7Q9BQ49 75 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PDCD1LG2Q9BQ51 273 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 RSPO3Q9BXY4 272 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 MRPL13Q9BYD1 178 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 NMNAT2Q9BZQ4 307 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 MED20Q9H944 212 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 KCNIP1Q9NZI2 227 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SLC22A13Q9Y226 551 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZNF835Q9Y2P0 537 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 UFC1Q9Y3C8 167 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 NEUROG3Q9Y4Z2 214 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ETV7Q9Y603 341 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SIRT4Q9Y6E7 314 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 PRSS21Q9Y6M0 314 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 NBEAL2Q6ZNJ1 2754 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SIP14410 1827 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 RLFQ13129 1914 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TRBV24-1A0A075B6N3 115 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 A0A0G2JK05 382 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 A0A1B0GTI1 187 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ZC3H12DA2A288 527 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 SLC22A20A6NK97 555 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CEBPZOSA8MTT3 80 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 K7EQS6 105 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PPP1R3DO95685 299 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 NUDT3O95989 172 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 MT-ATP6P00846 226 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 HLA-HP01893 362 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CATP04040 527 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 CHRM2P08172 466 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FURINP09958 794 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PRSS56P0CW18 603 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 TMEM225BP0DP42 221 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FRKP42685 505 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 HMGA2P52926 109 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 SRPXP78539 464 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 MRPS34P82930 218 aaKnown RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 HSD52Q0P140 79 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FUT5Q11128 374 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 GTF3C1Q12789 2109 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FZD2Q14332 565 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ADIPOQQ15848 244 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ZXDCQ2QGD7 858 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 ZNF385BQ569K4 471 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FFAR4Q5NUL3 377 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 RAET1LQ5VY80 246 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 PWWP2BQ6NUJ5 590 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 FAM71F2Q6NXP2 309 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 C6orf15Q6UXA7 325 aaPredicted RBP2.43□□□□□ -2.02
LIG4-203ENST00000442234 WDR82Q6UXN9 313 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 ZNF562Q6V9R5 426 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 MBOAT2Q6ZWT7 520 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 GKN2Q86XP6 184 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 CALHM1Q8IU99 346 aa2.43□□□□□ -2.02
LIG4-203ENST00000442234 NPWQ8N729 165 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms