RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ADAP1O75689 374 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 SCTP09683 121 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 OR5AC1P0C628 307 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 LYL1P12980 280 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 PTAFRP25105 342 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 CD40P25942 277 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 CFHR2P36980 270 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 NUP62P37198 522 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-206ENST00000441580 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-206ENST00000441580 RAB14P61106 215 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 PAX5Q02548 391 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 KLRB1Q12918 225 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 TMEM187Q14656 261 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 SMCO1Q147U7 214 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 PHLDA2Q53GA4 152 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 PRR30Q53SZ7 412 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-206ENST00000441580 CLLU1Q5K131 121 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 PRSS54Q6PEW0 395 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 TRAT1Q6PIZ9 186 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 LIAT1Q6ZQX7 453 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 ACOT7LQ6ZUV0 252 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 C11orf53Q8IXP5 236 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 CMTM1Q8IZ96 169 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 H1FOOQ8IZA3 346 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-206ENST00000441580 OR2Z1Q8NG97 314 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 OR10J5Q8NHC4 309 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 LILRB1Q8NHL6 650 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-206ENST00000441580 LRRC29Q8WV35 223 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 TMEM171Q8WVE6 324 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 RND1Q92730 232 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 SEC22AQ96IW7 307 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 SLC5A7Q9GZV3 580 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 DNTTIP1Q9H147 329 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 MBNL3Q9NUK0 354 aaKnown RBP11.13□□□□□ -0.63
CPSF4-206ENST00000441580 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 RNF222A6NCQ9 220 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 ZSCAN5BA6NJL1 495 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 SRRM5B3KS81 715 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 WNT2P09544 360 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 TNFSF4P23510 183 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 GATA4P43694 442 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 FAM27E3Q08E93 113 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 ATXN7L3Q14CW9 347 aaPredicted RBP11.12□□□□□ -0.63
CPSF4-206ENST00000441580 IGFBP7Q16270 282 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 C6orf183Q5T699 404 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 SLC35E4Q6ICL7 350 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 PPP1R35Q8TAP8 253 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 PLPPR1Q8TBJ4 325 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 SECTM1Q8WVN6 248 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 MRPL24Q96A35 216 aaKnown RBP11.12□□□□□ -0.63
CPSF4-206ENST00000441580 MEGF10Q96KG7 1140 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 DMRTA2Q96SC8 542 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 SPIN2AQ99865 258 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 SPIN2BQ9BPZ2 258 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 NGBQ9NPG2 151 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 KCNIP1Q9NZI2 227 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 OR14J1Q9UGF5 321 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 SH3BGRL2Q9UJC5 107 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 OR2W1Q9Y3N9 320 aa11.12□□□□□ -0.63
CPSF4-206ENST00000441580 URB1O60287 2271 aaKnown RBP11.12□□□□□ -0.63
CPSF4-206ENST00000441580 DMXL1Q9Y485 3027 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 CUL9Q8IWT3 2517 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 IGKV1-6A0A0C4DH72 117 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 MPPED1O15442 326 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 PHF1O43189 567 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-206ENST00000441580 HOXB5P09067 269 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 ASCL1P50553 236 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 IAH1Q2TAA2 248 aaPredicted RBP11.11□□□□□ -0.63
CPSF4-206ENST00000441580 GGNBP1Q5YKI7 109 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 ALKBH2Q6NS38 261 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 LDLRAD3Q86YD5 345 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 SLC7A5P1Q8MH63 180 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 OR8H3Q8N146 312 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 SCARB1Q8WTV0 552 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 IL22RA2Q969J5 263 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 UFSP2Q9NUQ7 469 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 PRR13Q9NZ81 148 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 DNAJB11Q9UBS4 358 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 DUSP13Q9UII6 198 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 TMED3Q9Y3Q3 217 aa11.11□□□□□ -0.63
CPSF4-206ENST00000441580 CHD3Q12873 2000 aaKnown RBP11.11□□□□□ -0.63
CPSF4-206ENST00000441580 PTPRZ1P23471 2315 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-206ENST00000441580 C3orf85A0A1B0GTC6 90 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 A0A1B0GW55 424 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 OOEPA6NGQ2 149 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 H0Y980 276 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 DUX4L2P0CJ85 424 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 DUX4L3P0CJ86 424 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 DUX4L4P0CJ87 422 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 DUX4L5P0CJ88 424 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 DUX4L6P0CJ89 424 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 DUX4L7P0CJ90 424 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 S100A10P60903 97 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 MSMPQ1L6U9 139 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 PCSK4Q6UW60 755 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 C20orf204Q6ZNR8 217 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 ZNF826PQ6ZT77 177 aa11.1□□□□□ -0.63
CPSF4-206ENST00000441580 ST6GALNAC3Q8NDV1 305 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms