RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 GUCA1AP43080 201 aaPredicted RBP17.5■□□□□ 0.39
SHOX2-203ENST00000441443 TAS2R30P59541 319 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 PNRC1Q12796 327 aaPredicted RBP17.5■□□□□ 0.39
SHOX2-203ENST00000441443 M0R135 149 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 TGOLN2O43493 480 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 OR4A8P0C604 315 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 BCL2P10415 239 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 GNRHRP30968 328 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 ERVS71-1P61550 626 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF787Q6DD87 383 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 SELENOHQ8IZQ5 122 aaKnown RBP17.49■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF799Q96GE5 643 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 SNHG12Q9BXW3 62 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 RPRMQ9NS64 109 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 LAMP3Q9UQV4 416 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 H3BMH7 237 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 NR2C1P13056 603 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 MRPS34P82930 218 aaKnown RBP17.49■□□□□ 0.39
SHOX2-203ENST00000441443 PHYHD1Q5SRE7 291 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 BEND2Q8NDZ0 799 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 CADM4Q8NFZ8 388 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 NCOR1O75376 2440 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 CELSR3Q9NYQ7 3312 aa17.49■□□□□ 0.39
SHOX2-203ENST00000441443 IGKV1-12A0A0C4DH73 117 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 IFNL4K9M1U5 179 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 IGKV1D-12P01611 117 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 ADIRFQ15847 76 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 KCNMB1Q16558 191 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 PLPPR5Q32ZL2 321 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 OR5L2Q8NGL0 311 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 ATP5SQ99766 215 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 DFFBO76075 338 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF66Q6ZN08 573 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 SSX7Q7RTT5 188 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 GJC3Q8NFK1 279 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 SLC7A10Q9NS82 523 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 PLEK2Q9NYT0 353 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 ST3GAL6Q9Y274 331 aa17.48■□□□□ 0.39
SHOX2-203ENST00000441443 CEBPZOSA8MTT3 80 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 TIAF1O95411 115 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 GLB1P16278 677 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 CTSSP25774 331 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 UCP3P55916 312 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 TMEM267Q0VDI3 215 aaPredicted RBP17.47■□□□□ 0.39
SHOX2-203ENST00000441443 OR10G4Q8NGN3 311 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 WFIKKN1Q96NZ8 548 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 SIGLEC12Q96PQ1 595 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 SPIN2AQ99865 258 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 SPIN2BQ9BPZ2 258 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 CBLN4Q9NTU7 201 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 P4HTMQ9NXG6 502 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 CISD1Q9NZ45 108 aaKnown RBP17.47■□□□□ 0.39
SHOX2-203ENST00000441443 FREM2Q5SZK8 3169 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 MSR1P21757 451 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 EIF3IQ13347 325 aaKnown RBP17.47■□□□□ 0.39
SHOX2-203ENST00000441443 ENDOGQ14249 297 aaKnown RBP17.47■□□□□ 0.39
SHOX2-203ENST00000441443 HIST3H3Q16695 136 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 OXGR1Q96P68 337 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 SRD5A3Q9H8P0 318 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 CEACAM1P13688 526 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 GZMHP20718 246 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 PLA2G5P39877 138 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 ABLIM2Q6H8Q1 611 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 RBM24Q9BX46 236 aaKnown RBP17.47■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF442Q9H7R0 627 aa17.47■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF726P1Q15940 193 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 C16orf82Q7Z2V1 217 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 TMEM37Q8WXS4 190 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF501Q96CX3 271 aaPredicted RBP17.46■□□□□ 0.39
SHOX2-203ENST00000441443 OR6C1Q96RD1 312 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 AHCTF1Q8WYP5 2266 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 PAX9P55771 341 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 PMS2P11Q13670 270 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 PRSS8Q16651 343 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF818PQ6ZRF7 136 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 H1FOOQ8IZA3 346 aaPredicted RBP17.46■□□□□ 0.39
SHOX2-203ENST00000441443 MRGPRX4Q96LA9 322 aa17.46■□□□□ 0.39
SHOX2-203ENST00000441443 OSR2Q8N2R0 312 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 PLPPR1Q8TBJ4 325 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 BORCS8Q96FH0 119 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 TMEM56Q96MV1 263 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 TMEM56-RWDD3S4R434 201 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 SUMO3P55854 103 aaPredicted RBP17.45■□□□□ 0.38
SHOX2-203ENST00000441443 RPS18P62269 152 aaKnown RBP17.45■□□□□ 0.38
SHOX2-203ENST00000441443 SRPXP78539 464 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 ID3Q02535 119 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 BAXQ07812 192 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 KIAA2026Q5HYC2 2103 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 GAPTQ8N292 157 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 GDF9O60383 454 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 IZUMO4Q1ZYL8 232 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 GUSBP11Q6P575 273 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 WNT16Q9UBV4 365 aa17.45■□□□□ 0.38
SHOX2-203ENST00000441443 IGHV3-15A0A0B4J1V0 119 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 IFNA5P01569 189 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 ZNF25P17030 456 aaPredicted RBP17.44■□□□□ 0.38
SHOX2-203ENST00000441443 IDH3GP51553 393 aaPredicted RBP17.44■□□□□ 0.38
SHOX2-203ENST00000441443 PAX5Q02548 391 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 EXT1Q16394 746 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 C21orf62-AS1Q17RA5 79 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms