RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 CCL28Q9NRJ3 127 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 NAT2P11245 290 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 TNFAIP6P98066 277 aaPredicted RBP11.26□□□□□ -0.61
BRPF3-203ENST00000441123 MRGPRGQ86SM5 289 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 CCL2P13500 99 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 PIGYQ3MUY2 71 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 DCAF12L2Q5VW00 463 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 MRGPRDQ8TDS7 321 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 G6PC2Q9NQR9 355 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 CNTRLQ7Z7A1 2325 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 NYNRINQ9P2P1 1898 aaKnown RBP11.26□□□□□ -0.61
BRPF3-203ENST00000441123 CCL4P13236 92 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 IL9P15248 144 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 MAGEA5P43359 124 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 ZNF83P51522 516 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 CEACAM21Q3KPI0 293 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 PMS2CLQ68D20 193 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 DHRS13Q6UX07 377 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 LYZL2Q7Z4W2 148 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 ZNRF4Q8WWF5 429 aa11.26□□□□□ -0.61
BRPF3-203ENST00000441123 A0A1W2PN81 502 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 CHRNA7P36544 502 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 GNG4P50150 75 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 SAXO1Q8IYX7 474 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 LYG1Q8N1E2 194 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 TCTEX1D1Q8N7M0 179 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 DTD1Q8TEA8 209 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 RNF122Q9H9V4 155 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 NKX2-6A6NCS4 301 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 PDE6DO43924 150 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 HIST1H3AP68431 136 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 BSXQ3C1V8 233 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 TSPO2Q5TGU0 170 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 FBXW9Q5XUX1 488 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 ZNF660Q6AZW8 331 aaPredicted RBP11.25□□□□□ -0.61
BRPF3-203ENST00000441123 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 ZNF385AQ96PM9 386 aaKnown RBP11.25□□□□□ -0.61
BRPF3-203ENST00000441123 AMELYQ99218 206 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 PRR13Q9NZ81 148 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 LIPGQ9Y5X9 500 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 LYZL6O75951 148 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 FABP4P15090 132 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 SPEM2Q0P670 501 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 HES3Q5TGS1 186 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 WDR61Q9GZS3 305 aaKnown RBP11.25□□□□□ -0.61
BRPF3-203ENST00000441123 H0Y980 276 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 OR2A4O95047 310 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 IL11P20809 199 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 CCKARP32238 428 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 FGF12P61328 243 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 ALKBH6Q3KRA9 238 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 KHDC3LQ587J8 217 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 OR2A7Q96R45 310 aa11.25□□□□□ -0.61
BRPF3-203ENST00000441123 YTHDF2Q9Y5A9 579 aaKnown RBP11.25□□□□□ -0.61
BRPF3-203ENST00000441123 C7orf77A4D0Y5 90 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 ZNF154Q13106 437 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 STUMQ69YW2 141 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 CLEC9AQ6UXN8 241 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
BRPF3-203ENST00000441123 LRFN3Q9BTN0 628 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 ZNF835Q9Y2P0 537 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 NEUROG3Q9Y4Z2 214 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 ANK1P16157 1881 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 THY1P04216 161 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 IGKV3-11P04433 115 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 PRRX1P54821 245 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 SIGLEC14Q08ET2 396 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 TRIP6Q15654 476 aaKnown RBP11.24□□□□□ -0.61
BRPF3-203ENST00000441123 LINC00114Q6XXX2 140 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 C19orf35Q6ZS72 473 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 SLC25A22Q9H936 323 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 SLC7A10Q9NS82 523 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 A0A0J9YW62 118 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 H1FOOQ8IZA3 346 aaPredicted RBP11.24□□□□□ -0.61
BRPF3-203ENST00000441123 ABHD3Q8WU67 409 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 DDA1Q9BW61 102 aa11.24□□□□□ -0.61
BRPF3-203ENST00000441123 TECRQ9NZ01 308 aaKnown RBP11.24□□□□□ -0.61
BRPF3-203ENST00000441123 CDRT15L2A8MXV6 281 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 NTF3P20783 257 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 SERF2P84101 59 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 OR10D4PQ8NGN7 298 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 LOC390937A0A1W2PQ73 354 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 DEFB108AA8MXU0 73 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 COX5BP10606 129 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 TFF2Q03403 129 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 SFTPA2Q8IWL1 248 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 NPAS1Q99742 590 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 ESRP2Q9H6T0 727 aaKnown RBP11.23□□□□□ -0.61
BRPF3-203ENST00000441123 CLCF1Q9UBD9 225 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 STARD6P59095 220 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 PSG4Q00888 419 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 TMEM230Q96A57 120 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 PRNDQ9UKY0 176 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 LHFPL6Q9Y693 200 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 NPIPB9F8W1W9 429 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 SP1P08047 785 aa11.23□□□□□ -0.61
BRPF3-203ENST00000441123 DCAF10Q5QP82 559 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms