RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PRSS57Q6UWY2 283 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 TRIM63Q969Q1 353 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 LPAR3Q9UBY5 353 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 CLN8Q9UBY8 286 aa17.19■□□□□ 0.34
CHD3-204ENST00000439235 ZNF107Q9UII5 783 aaPredicted RBP17.19■□□□□ 0.34
CHD3-204ENST00000439235 RBMX2Q9Y388 322 aaKnown RBP17.19■□□□□ 0.34
CHD3-204ENST00000439235 IGHV4-30-2A0A087WSY4 118 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 ODAMA1E959 279 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 UPK1BO75841 260 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 IGHV2-5P01817 119 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 CSF1P09603 554 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 GLIPR1P48060 266 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 AP3S2P59780 193 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 ESCO2Q56NI9 601 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 Q5PR19 223 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 HOGA1Q86XE5 327 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 OR4K15Q8NH41 348 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 CLDND2Q8NHS1 167 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 ST6GALNAC5Q9BVH7 336 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 ZNF286AQ9HBT8 521 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 OR6C3Q9NZP0 311 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 KLK11Q9UBX7 282 aa17.18■□□□□ 0.34
CHD3-204ENST00000439235 KIR2DS1A0A191URI9 304 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 ORC5O43913 435 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 ECDO95905 644 aaPredicted RBP17.17■□□□□ 0.34
CHD3-204ENST00000439235 HEXAP06865 529 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 KIR2DS4P43632 304 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 GNB2P62879 340 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 KIR2DS1Q14954 304 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 C6orf183Q5T699 404 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 WDR25Q64LD2 544 aaPredicted RBP17.17■□□□□ 0.34
CHD3-204ENST00000439235 ZNF880Q6PDB4 577 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 C16orf87Q6PH81 154 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 TRAT1Q6PIZ9 186 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 DCHS2Q6V1P9 2916 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 ZNF841Q6ZN19 808 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 GVQW1Q8N7I0 195 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 TPRX1Q8N7U7 411 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 BEST4Q8NFU0 473 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 H1FXQ92522 213 aaKnown RBP17.17■□□□□ 0.34
CHD3-204ENST00000439235 Q9N2K0 584 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 PALMDQ9NP74 551 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 ABCB10Q9NRK6 738 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 KCNIP1Q9NZI2 227 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 ZNF230Q9UIE0 474 aaPredicted RBP17.17■□□□□ 0.34
CHD3-204ENST00000439235 NBPF19A0A087WUL8 3843 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 FBN2P35556 2912 aa17.17■□□□□ 0.34
CHD3-204ENST00000439235 TRBV23-1A0A0A0MS06 115 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 hADV38S2A0JD32 116 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 LANCL1O43813 399 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 NAT1P18440 290 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 GLP1RP43220 463 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 MEF2CQ06413 473 aaPredicted RBP17.16■□□□□ 0.34
CHD3-204ENST00000439235 C11orf91Q3C1V1 193 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 ZNF57Q68EA5 555 aaPredicted RBP17.16■□□□□ 0.34
CHD3-204ENST00000439235 Q6ZS49 121 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 TOMM5Q8N4H5 51 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 CCDC107Q8WV48 283 aa17.16■□□□□ 0.34
CHD3-204ENST00000439235 SSBP3Q9BWW4 388 aaPredicted RBP17.16■□□□□ 0.34
CHD3-204ENST00000439235 MBNL3Q9NUK0 354 aaKnown RBP17.16■□□□□ 0.34
CHD3-204ENST00000439235 LRBAP50851 2863 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 TRGV10A0A0A0MS01 117 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 A0A1W2PQ09 198 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 FCN3O75636 299 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 TAS2R19P59542 299 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 RPL31P62899 125 aaKnown RBP17.15■□□□□ 0.34
CHD3-204ENST00000439235 HLA-DRB3P79483 266 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 DCTN2Q13561 401 aaKnown RBP17.15■□□□□ 0.34
CHD3-204ENST00000439235 ACTBL2Q562R1 376 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 ZNF554Q86TJ5 538 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 FGFRL1Q8N441 504 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 TMEM229BQ8NBD8 167 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 MAFIPQ8WZ33 124 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 RAB9BQ9NP90 201 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 CREBBPQ92793 2442 aa17.15■□□□□ 0.34
CHD3-204ENST00000439235 IGHV4-61A0A0C4DH41 118 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 ANKRD20A5PA0PJZ0 165 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 ZNF736B4DX44 427 aaPredicted RBP17.14■□□□□ 0.33
CHD3-204ENST00000439235 TRDCB7Z8K6 153 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 FCER2P06734 321 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 TBPP20226 339 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 TAS2R46P59540 309 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 LMO4P61968 165 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 CD276Q5ZPR3 534 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 Q6ZPA2 131 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 ZNF565Q8N9K5 539 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 MRGPRDQ8TDS7 321 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 DEDD2Q8WXF8 326 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 SNAPC3Q92966 411 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 FOXC2Q99958 501 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 DCTN5Q9BTE1 182 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 ANXA10Q9UJ72 324 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 LINC00312Q9Y6C7 94 aa17.14■□□□□ 0.33
CHD3-204ENST00000439235 RCC1P18754 421 aaPredicted RBP17.13■□□□□ 0.33
CHD3-204ENST00000439235 GZMHP20718 246 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 USF1P22415 310 aaPredicted RBP17.13■□□□□ 0.33
CHD3-204ENST00000439235 ARPC4P59998 168 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 SEC61A1P61619 476 aaKnown RBP17.13■□□□□ 0.33
CHD3-204ENST00000439235 HMGN3Q15651 99 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 CR1LQ2VPA4 569 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms