RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RPL7L1Q6DKI1 246 aaKnown RBP10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 UBAC2Q8NBM4 344 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 RFESDQ8TAC1 157 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 HDHD3Q9BSH5 251 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 AK3Q9UIJ7 227 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 KLK13Q9UKR3 277 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 DOCK10Q96BY6 2186 aa10.03□□□□□ -0.8
TRAPPC9-202ENST00000438773 CHD9Q3L8U1 2897 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 CLDN1O95832 211 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 HPNP05981 417 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 CD37P11049 281 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 NAT2P11245 290 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 BCL3P20749 454 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 KLF3P57682 345 aaPredicted RBP10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 SLC36A1Q7Z2H8 476 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 BIVMQ86UB2 503 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 ABHD5Q8WTS1 349 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 MSL2Q9HCI7 577 aa10.02□□□□□ -0.8
TRAPPC9-202ENST00000438773 FABP1P07148 127 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 PRF1P14222 555 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 DYRK2Q92630 601 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 RNF166Q96A37 237 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 RBMXL1Q96E39 390 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 NIPSNAP3BQ9BS92 247 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 ERRFI1Q9UJM3 462 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 SPTBN5Q9NRC6 3674 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 J3QT63 122 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 DUS4LO95620 317 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 CRYBA1P05813 215 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 SPP1P10451 314 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 HNF1AP20823 631 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 G0S2P27469 103 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 RAB5CP51148 216 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 SSTP61278 116 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF260Q3ZCT1 412 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 GALMQ96C23 342 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 BOD1Q96IK1 185 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF107Q9UII5 783 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 TP53TG5Q9Y2B4 290 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 LRP5LA4QPB2 252 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF708P17019 499 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 PTAFRP25105 342 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 RAB13P51153 203 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF705AQ6ZN79 300 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 C1orf87Q8N0U7 546 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 OPN3Q9H1Y3 402 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 ESRP2Q9H6T0 727 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF552Q9H707 407 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 TAAR3PQ9P1P4 343 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 RAXQ9Y2V3 346 aa10.02□□□□□ -0.81
TRAPPC9-202ENST00000438773 TRBV23-1A0A0A0MS06 115 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 TMEM30CPA0ZSE6 113 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 FAM90A27PA6NNH2 459 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 MIDNQ504T8 468 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 LINC00518Q8N0U6 118 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 LRRC29Q8WV35 223 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF524Q96C55 264 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF488Q96MN9 340 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 USB1Q9BQ65 265 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 PCDH15Q96QU1 1955 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 WISP1O95388 367 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 KCNMB1Q16558 191 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 OR1K1Q8NGR3 316 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 TCEAL7Q9BRU2 100 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 SERTAD4Q9NUC0 356 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 MRPS18CQ9Y3D5 142 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 OTOGLQ3ZCN5 2332 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 CYB5BO43169 146 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 SFT2D2O95562 160 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 NBL1P41271 181 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 LHX2P50458 406 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 RPUSD3Q6P087 351 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 SCCPDHQ8NBX0 429 aa10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 CPEB3Q8NE35 698 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-202ENST00000438773 CADP27708 2225 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 ABCA4P78363 2273 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 C3orf80F5H4A9 247 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 ONECUT2O95948 504 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 H2AFB1P0C5Y9 115 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 MDKP21741 143 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-202ENST00000438773 FAM3AP98173 230 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 RPUSD4Q96CM3 377 aaKnown RBP10□□□□□ -0.81
TRAPPC9-202ENST00000438773 LIPGQ9Y5X9 500 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 HEATR1Q9H583 2144 aaKnown RBP10□□□□□ -0.81
TRAPPC9-202ENST00000438773 TRAV14DV4A0A0A6YYC5 116 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 A0A1B0GTI1 187 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 TMEM218A2RU14 115 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 P2RY6Q15077 328 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 PLGLAQ15195 96 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 PEAR1Q5VY43 1037 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-202ENST00000438773 HSD17B13Q7Z5P4 300 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-202ENST00000438773 LINC00470Q9BZP3 86 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 CXXC4Q9H2H0 198 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 CREBBPQ92793 2442 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 A0A1W2PPH5 198 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 HMSDA8MTL9 139 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 SSSCA1O60232 199 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 TNFRSF1AP19438 455 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 GPR12P47775 334 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms