RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MLLT11Q13015 90 aaPredicted RBP20■□□□□ 0.79
RAPGEF1-206ENST00000438647 TPBGQ13641 420 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 INSL4Q14641 139 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 C17orf58Q2M2W7 97 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 HSD17B12Q53GQ0 312 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 PLA1AQ53H76 456 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 GLT8D1Q68CQ7 371 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 SLC35E4Q6ICL7 350 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 CEACAM19Q7Z692 300 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 DYNAPQ8N1N2 210 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 OR4P4Q8NGL7 312 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 PLPPR1Q8TBJ4 325 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 CREB3L1Q96BA8 519 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 CALYQ9NYX4 217 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 PITPNC1Q9UKF7 332 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 A0A087X0M5 115 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 A0A1B0GX30 115 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 TMEM30CPA0ZSE6 113 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 TOR1AO14656 332 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 DYNLT3P51808 116 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 LDLRAD2Q5SZI1 272 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 DTX3Q8N9I9 347 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 OR13A1Q8NGR1 328 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 PIFOQ8TCI5 191 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 NEK7Q8TDX7 302 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 CST11Q9H112 138 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 Q9H521 79 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 HILPDAQ9Y5L2 63 aa19.99■□□□□ 0.79
RAPGEF1-206ENST00000438647 H3BUI4 141 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 CRTAPO75718 401 aaPredicted RBP19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 IL1AP01583 271 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 UBBP0CG47 229 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 CGB3P0DN86 165 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 CGB7P0DN87 165 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 SRMP19623 302 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 ARHGDIBP52566 201 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 PRRX1P54821 245 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 RBM39Q14498 530 aaKnown RBP19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 TBCEQ15813 527 aaPredicted RBP19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM27D1Q5T7N8 215 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 KIRREL1Q96J84 757 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 LINC00574Q9H8X3 128 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 ZNF581Q9P0T4 197 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 DPM3Q9P2X0 92 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 TCF19Q9Y242 345 aa19.98■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A10PA6NDY2 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A18PA6NE21 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A16PA6NEW6 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A20PA6NIJ5 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A7PA6NKC0 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A22PA8MWA6 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A12PA8MX19 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A5PA8MXJ8 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A23PA8MXZ1 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 IGLV1-47P01700 117 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 UCHL1P09936 223 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A15PP0C7V4 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A13PP0C7W8 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A14PP0C7W9 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM90A24PP0C7X0 464 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 MGMTP16455 207 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 CPEP16870 476 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 NFYBP25208 207 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 GDNFP39905 211 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 BAIAP2L2Q6UXY1 529 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 OR10A7Q8NGE5 316 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 OR4C13Q8NGP0 309 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 MRGPRDQ8TDS7 321 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 TMEM203Q969S6 136 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 MGLLQ99685 303 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 SELENOIQ9C0D9 397 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 NPFFR1Q9GZQ6 430 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 RANBP3Q9H6Z4 567 aaPredicted RBP19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 ZNF286AQ9HBT8 521 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 IDI2-AS1Q9NZ38 188 aa19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 RCC2Q9P258 522 aaKnown RBP19.97■□□□□ 0.79
RAPGEF1-206ENST00000438647 FAM172BPA6NC97 362 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 LEUTXA8MZ59 168 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 MCRIP1C9JLW8 97 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 F2RL2O00254 374 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 GZMHP20718 246 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 CEACAM3P40198 252 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 GP2P55259 537 aaKnown RBP19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 BRICD5Q6PL45 260 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 LRRTM1Q86UE6 522 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 OR9G1Q8NH87 305 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 BANF2Q9H503 90 aa19.96■□□□□ 0.79
RAPGEF1-206ENST00000438647 NPIPB11E5RHQ5 1161 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 ARL6IP5O75915 188 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 GABRA5P31644 462 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 MAP2K4P45985 399 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 RAB13P51153 203 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 PROK1P58294 105 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 HLA-DRB5Q30154 266 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 ZNF367Q7RTV3 350 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 TMEM104Q8NE00 496 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 Q96M66 194 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 FBLN5Q9UBX5 448 aa19.95■□□□□ 0.78
RAPGEF1-206ENST00000438647 GABARAPL2P60520 117 aa19.94■□□□□ 0.78
RAPGEF1-206ENST00000438647 RPS25P62851 125 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms