RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 CCRL2O00421 344 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 RRP9O43818 475 aaKnown RBP9.32□□□□□ -0.92
COL28A1-203ENST00000435823 MPIG6BO95866 241 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 CRYBA1P05813 215 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A15PP0C7V4 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A13PP0C7W8 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A14PP0C7W9 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A24PP0C7X0 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
COL28A1-203ENST00000435823 CDK2P24941 298 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 HTR2CP28335 458 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 PAX5Q02548 391 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FOXL1Q12952 345 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 RBM39Q14498 530 aaKnown RBP9.32□□□□□ -0.92
COL28A1-203ENST00000435823 SSX1Q16384 188 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 KCTD21Q4G0X4 260 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 PRAMEF5Q5TYX0 476 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 RSBN1Q5VWQ0 802 aaPredicted RBP9.32□□□□□ -0.92
COL28A1-203ENST00000435823 SLC35E4Q6ICL7 350 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 HEPN1Q6WQI6 88 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 BEND2Q8NDZ0 799 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 TMEM104Q8NE00 496 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 OR11H6Q8NGC7 330 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 OR5R1Q8NH85 324 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 PLPPR1Q8TBJ4 325 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM46BQ96A09 425 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 CLEC7AQ9BXN2 247 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 PLGRKTQ9HBL7 147 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 KIF25Q9UIL4 384 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 KBTBD11-OT1A0A1B0GTJ5 212 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 ODF3BA8MYP8 253 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 PDCD5O14737 125 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 SLC22A1O15245 554 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 HKR1P10072 659 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 GALP22466 123 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 MYL9P24844 172 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 PSMD7P51665 324 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 ZNF626Q68DY1 528 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 RAB12Q6IQ22 244 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 RTN4RL2Q86UN3 420 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 OR13A1Q8NGR1 328 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 KCNG3Q8TAE7 436 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 ZNF596Q8TC21 504 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 MRGPRDQ8TDS7 321 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 C17orf50Q8WW18 174 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 DYRK2Q92630 601 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 Q96M66 194 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 CHIAQ9BZP6 476 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 ZNF581Q9P0T4 197 aa9.31□□□□□ -0.92
COL28A1-203ENST00000435823 RCC2Q9P258 522 aaKnown RBP9.31□□□□□ -0.92
COL28A1-203ENST00000435823 AK6Q9Y3D8 172 aaKnown RBP9.31□□□□□ -0.92
COL28A1-203ENST00000435823 TRDV1A0A1B0GX56 115 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 SLC17A2O00624 439 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 TOR1AO14656 332 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 MMP23AO75900 390 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 BPNT1O95861 308 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 GLAP06280 429 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 FUT3P21217 361 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 OMGP23515 440 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 COMPP49747 757 aaPredicted RBP9.3□□□□□ -0.92
COL28A1-203ENST00000435823 RPL15P61313 204 aaKnown RBP9.3□□□□□ -0.92
COL28A1-203ENST00000435823 RAB11BQ15907 218 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 AANATQ16613 207 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 LRRC75BQ2VPJ9 315 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 MINOS1Q5TGZ0 78 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 BRICD5Q6PL45 260 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 CD200R1LQ6Q8B3 271 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 GDPGP1Q6ZNW5 385 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 LHFPL4Q7Z7J7 247 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 ABHD12Q8N2K0 398 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 NDNFQ8TB73 568 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 MALSU1Q96EH3 234 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 TMEM59Q9BXS4 323 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 MEGF9Q9H1U4 602 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 ETAA1Q9NY74 926 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 VPREB3Q9UKI3 123 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 PEX16Q9Y5Y5 336 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 MINOS1-NBL1R4GNA1 71 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 V9GY05 133 aa9.3□□□□□ -0.92
COL28A1-203ENST00000435823 KIAA2026Q5HYC2 2103 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 TRAV1-2A0A0B4J238 106 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 H3BUX3 64 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 AIPO00170 330 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 GPR137BO60478 399 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 PDCD6O75340 191 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 CA11O75493 328 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 IL1AP01583 271 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 CGB3P0DN86 165 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 CGB7P0DN87 165 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 CD37P11049 281 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 ARSBP15848 533 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 GZMHP20718 246 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 NFYBP25208 207 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 HTR1DP28221 377 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 RPS27AP62979 156 aaKnown RBP9.29□□□□□ -0.92
COL28A1-203ENST00000435823 P2RY14Q15391 338 aa9.29□□□□□ -0.92
COL28A1-203ENST00000435823 C17orf58Q2M2W7 97 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms