RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 MDP1Q86V88 176 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 GAPTQ8N292 157 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 MRPL30Q8TCC3 161 aaKnown RBP15.87■□□□□ 0.13
CLK1-205ENST00000434813 FAM122AQ96E09 287 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 ADAT1Q9BUB4 502 aaKnown RBP15.87■□□□□ 0.13
CLK1-205ENST00000434813 SPRR3Q9UBC9 169 aa15.87■□□□□ 0.13
CLK1-205ENST00000434813 UBE2J1Q9Y385 318 aaPredicted RBP15.87■□□□□ 0.13
CLK1-205ENST00000434813 DNAJC13O75165 2243 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 TRGV5A0A0B4J1U4 118 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 IGKV1D-13A0A0B4J2D9 117 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 NKX2-6A6NCS4 301 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 IGKV1-13P0DP09 117 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 SPP1P10451 314 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 ATP1A1-AS1Q5TC04 95 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 DHRS7BQ6IAN0 325 aaPredicted RBP15.86■□□□□ 0.13
CLK1-205ENST00000434813 C5orf24Q7Z6I8 188 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 ZNF695Q8IW36 515 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 BOD1Q96IK1 185 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 ABHD14BQ96IU4 210 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 DEFB127Q9H1M4 99 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 ASCL3Q9NQ33 180 aa15.86■□□□□ 0.13
CLK1-205ENST00000434813 ATP6V1G2-DDX39BF2Z307 99 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 J3QW42 95 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 SFTA3P0C7M3 94 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 DANCRP0C864 163 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 CEACAM1P13688 526 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 ZNF766Q5HY98 468 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 SELENOHQ8IZQ5 122 aaKnown RBP15.85■□□□□ 0.13
CLK1-205ENST00000434813 WNT2BQ93097 391 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 ZNF488Q96MN9 340 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 IFT22Q9H7X7 185 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 ZDHHC11Q9H8X9 412 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 ZNF175Q9Y473 711 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 CLEC18AA5D8T8 446 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 ARGFXA6NJG6 315 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 FAM157AC9JC47 383 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 OR8U9P0C7N5 309 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 UCP1P25874 307 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 DVL1P1P54792 670 aaPredicted RBP15.85■□□□□ 0.13
CLK1-205ENST00000434813 RNFT1Q5M7Z0 435 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 ZNF880Q6PDB4 577 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 FAM58AQ8N1B3 248 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 CLEC18CQ8NCF0 446 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 OR8U1Q8NH10 309 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 OR51I2Q9H344 312 aa15.85■□□□□ 0.13
CLK1-205ENST00000434813 TRAV24A0A0B4J272 114 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 J3QT63 122 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 NKX2-1P43699 371 aaPredicted RBP15.84■□□□□ 0.13
CLK1-205ENST00000434813 ID4P47928 161 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 ARG2P78540 354 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 EWSR1Q01844 656 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLK1-205ENST00000434813 OR2T2Q6IF00 324 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 TMEM88Q6PEY1 159 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 PCSK4Q6UW60 755 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 TMEM178AQ8NBL3 297 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 LILRB1Q8NHL6 650 aaPredicted RBP15.84■□□□□ 0.13
CLK1-205ENST00000434813 NDRG3Q9UGV2 375 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 H0Y980 276 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 F12P00748 615 aaPredicted RBP15.84■□□□□ 0.13
CLK1-205ENST00000434813 NPBWR1P48145 328 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 HLA-DRB3P79483 266 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 NHLH2Q02577 135 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 NMSQ5H8A3 153 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 VASH2Q86V25 355 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 OR2C3Q8N628 320 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 COMMD1Q8N668 190 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 CABLES2Q9BTV7 478 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 OR51B6Q9H340 312 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 CCL28Q9NRJ3 127 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 LUZP4Q9P127 313 aa15.84■□□□□ 0.13
CLK1-205ENST00000434813 AGPAT2O15120 278 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 PVALBP20472 110 aaPredicted RBP15.83■□□□□ 0.12
CLK1-205ENST00000434813 CA6P23280 308 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 CD80P33681 288 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 RAB5CP51148 216 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 TBC1D28Q2M2D7 210 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 HFEQ30201 348 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 C20orf204Q6ZNR8 217 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 CBLN2Q8IUK8 224 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 CMTM1Q8IZ96 169 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 IL22RA2Q969J5 263 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 AIFM2Q9BRQ8 373 aa15.83■□□□□ 0.12
CLK1-205ENST00000434813 HSD17B6O14756 317 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 ADAM20O43506 726 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 VDAC1P21796 283 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 UCP2P55851 309 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 SOX8P57073 446 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 IGF2-ASQ6U949 168 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 C17orf78Q8N4C9 275 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 OR5D13Q8NGL4 314 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 GMPPAQ96IJ6 420 aaPredicted RBP15.82■□□□□ 0.12
CLK1-205ENST00000434813 KIRREL1Q96J84 757 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 DLL3Q9NYJ7 618 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 STRAPQ9Y3F4 350 aaKnown RBP15.82■□□□□ 0.12
CLK1-205ENST00000434813 TSPAN15O95858 294 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 ZNF14P17017 642 aaPredicted RBP15.82■□□□□ 0.12
CLK1-205ENST00000434813 MIDNQ504T8 468 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 SPATA46Q5T0L3 261 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 RDH5Q92781 318 aa15.82■□□□□ 0.12
CLK1-205ENST00000434813 RTL8AQ9BWD3 113 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms