RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 IGKV1D-17A0A075B6S4 117 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 IGHV1-69-2A0A0G2JMI3 117 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 KIAA1324LA8MWY0 1029 aaPredicted RBP9.42□□□□□ -0.9
LINC00539-203ENST00000434601 DISC1C4P0D8 188 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 TMEM178BH3BS89 294 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 PSPNO60542 156 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 CD8AP01732 235 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 TFF1P04155 84 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 AMY2AP04746 511 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 PRDX2P32119 198 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 HRH1P35367 487 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 KCNJ3P48549 501 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 CCR6P51684 374 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 ATP5J2P56134 94 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 ARPC4P59998 168 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 ATXN7L3Q14CW9 347 aaPredicted RBP9.42□□□□□ -0.9
LINC00539-203ENST00000434601 ZMYND11Q15326 602 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 SRSF7Q16629 238 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC00539-203ENST00000434601 MICBQ29980 383 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 VAX1Q5SQQ9 334 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 FAM201AQ5SY85 155 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 TEX36Q5VZQ5 186 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 STUMQ69YW2 141 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 SFRP4Q6FHJ7 346 aaPredicted RBP9.42□□□□□ -0.9
LINC00539-203ENST00000434601 Q6ZPA2 131 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 CD177Q8N6Q3 437 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 OR5T2Q8NGG2 359 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 OR5H2Q8NGV7 314 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 OR56B4Q8NH76 319 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 ANGPTL6Q8NI99 470 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 MRPL30Q8TCC3 161 aaKnown RBP9.42□□□□□ -0.9
LINC00539-203ENST00000434601 IGFBPL1Q8WX77 278 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 UPRTQ96BW1 309 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 CACNG6Q9BXT2 260 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 RAB1BQ9H0U4 201 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 TMEM165Q9HC07 324 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 TMEM106BQ9NUM4 274 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 DCAF16Q9NXF7 216 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 SLC2A8Q9NY64 477 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 NUBP2Q9Y5Y2 271 aa9.42□□□□□ -0.9
LINC00539-203ENST00000434601 FBN1P35555 2871 aaKnown RBP9.42□□□□□ -0.9
LINC00539-203ENST00000434601 hCG_2014768A0A024R1R8 64 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 IGKV1D-8A0A087WSZ0 117 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 TRBV6-6A0A0A6YYG2 114 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 TMEM82A0PJX8 343 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 LGALS8O00214 317 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF737O75373 536 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 PMP2P02689 132 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 CSN2P05814 226 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF735P0CB33 412 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 MUC1P15941 1255 aaPredicted RBP9.41□□□□□ -0.9
LINC00539-203ENST00000434601 GABRA2P47869 451 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 OR3A1P47881 315 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 HFEQ30201 348 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 CHRFAM7AQ494W8 412 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF497Q6ZNH5 498 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 Q6ZS49 121 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 BTN2A1Q7KYR7 527 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 MOB1BQ7L9L4 216 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 GAPTQ8N292 157 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 ASCC1Q8N9N2 400 aaKnown RBP9.41□□□□□ -0.9
LINC00539-203ENST00000434601 OR51S1Q8NGJ8 323 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 PPP1R35Q8TAP8 253 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 PLPPR1Q8TBJ4 325 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 NEU4Q8WWR8 484 aaPredicted RBP9.41□□□□□ -0.9
LINC00539-203ENST00000434601 CCL17Q92583 94 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 CREB3L1Q96BA8 519 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 MDFIQ99750 246 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 PRRT1Q99946 306 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 C20orf85Q9H1P6 137 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 Q9N2K0 584 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 ANXA10Q9UJ72 324 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 LAMP3Q9UQV4 416 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 STAB1Q9NY15 2570 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 DNHD1Q96M86 4753 aa9.41□□□□□ -0.9
LINC00539-203ENST00000434601 PPIAL4EA0A075B759 164 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 TRAV38-1A0A0B4J264 116 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 TMEM30CPA0ZSE6 113 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 NKX6-3A6NJ46 265 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 PPIAL4DF5H284 164 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 CRLF1O75462 422 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF205O95201 554 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 GYPAP02724 150 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 TCRBP04435 133 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 IFNA6P05013 189 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 PPIAL4FP0DN26 164 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 OR3A3P47888 321 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 HLA-DRB3P79483 266 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 CDK10Q15131 360 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 RBMS2Q15434 407 aaKnown RBP9.4□□□□□ -0.9
LINC00539-203ENST00000434601 GRK1Q15835 563 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 RSBN1Q5VWQ0 802 aaPredicted RBP9.4□□□□□ -0.9
LINC00539-203ENST00000434601 SLC35E4Q6ICL7 350 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF880Q6PDB4 577 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 IDO2Q6ZQW0 420 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 C17orf107Q6ZR85 190 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 ARRDC1Q8N5I2 433 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms