RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 HSD17B6O14756 317 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 ADAM20O43506 726 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 PGLYRP1O75594 196 aaPredicted RBP8.9□□□□□ -0.99
CD44-210ENST00000434472 IL18BPO95998 194 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 PRH1P02810 166 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 OR8U9P0C7N5 309 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 GLI4P10075 376 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 SELEP16581 610 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 WNT5AP41221 380 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 SOX8P57073 446 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 NHLH2Q02577 135 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 ZNF616Q08AN1 781 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 HERPUD1Q15011 391 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 TSC22D1Q15714 1073 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 GUK1Q16774 197 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 MIDNQ504T8 468 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 NMSQ5H8A3 153 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 ZNF766Q5HY98 468 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 HES3Q5TGS1 186 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 SHEQ5VZ18 495 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.9□□□□□ -0.99
CD44-210ENST00000434472 MDP1Q86V88 176 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 H1FOOQ8IZA3 346 aaPredicted RBP8.9□□□□□ -0.99
CD44-210ENST00000434472 IL22RA1Q8N6P7 574 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 OR8U1Q8NH10 309 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 OR10J5Q8NHC4 309 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 GMPPAQ96IJ6 420 aaPredicted RBP8.9□□□□□ -0.99
CD44-210ENST00000434472 HS3ST6Q96QI5 342 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 DEFB127Q9H1M4 99 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 C12orf49Q9H741 205 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 CCL28Q9NRJ3 127 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 SMCO4Q9NRQ5 59 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 DLL3Q9NYJ7 618 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 POLDIP2Q9Y2S7 368 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 OR2W1Q9Y3N9 320 aa8.9□□□□□ -0.99
CD44-210ENST00000434472 LAMA1P25391 3075 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 DOCK10Q96BY6 2186 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 BTBD17A6NE02 478 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 FAM24AA6NFZ4 105 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 FAM157AC9JC47 383 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 WRBO00258 174 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 AGPAT2O15120 278 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 HOXB1P14653 301 aaPredicted RBP8.89□□□□□ -0.99
CD44-210ENST00000434472 PAX6P26367 422 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 CD82P27701 267 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 ARG2P78540 354 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 ID3Q02535 119 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 TGFBR3Q03167 851 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 OR8G1Q15617 311 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 C3AR1Q16581 482 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 HIKESHIQ53FT3 197 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 ZNF324BQ6AW86 544 aaPredicted RBP8.89□□□□□ -0.99
CD44-210ENST00000434472 OR2T2Q6IF00 324 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 TMEM88Q6PEY1 159 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 DHRS13Q6UX07 377 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 CLEC9AQ6UXN8 241 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 P4HA3Q7Z4N8 544 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 CBLN2Q8IUK8 224 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 OR10Z1Q8NGY1 313 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 LILRB1Q8NHL6 650 aaPredicted RBP8.89□□□□□ -0.99
CD44-210ENST00000434472 GNPNAT1Q96EK6 184 aaPredicted RBP8.89□□□□□ -0.99
CD44-210ENST00000434472 AKR1E2Q96JD6 320 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 ADAT1Q9BUB4 502 aaKnown RBP8.89□□□□□ -0.99
CD44-210ENST00000434472 CDH20Q9HBT6 801 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 TMEM9BQ9NQ34 198 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 IL36RNQ9UBH0 155 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 LIPGQ9Y5X9 500 aa8.89□□□□□ -0.99
CD44-210ENST00000434472 TRAV24A0A0B4J272 114 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 IGKV1D-13A0A0B4J2D9 117 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 IGKV1-6A0A0C4DH72 117 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 A0A1B0GU03 582 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 IGSF23A1L1A6 192 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 NDUFA2O43678 99 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 IGKV1-13P0DP09 117 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 ZNF44P15621 663 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 CA6P23280 308 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 F2RP25116 425 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 POLR2GP62487 172 aaKnown RBP eCLIP8.88□□□□□ -0.99
CD44-210ENST00000434472 GABRA6Q16445 453 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 AVPI1Q5T686 147 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 Q6P435 159 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 PCSK4Q6UW60 755 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 TMEM252Q8N6L7 170 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 C15orf54Q8N8G6 183 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 HSD17B11Q8NBQ5 300 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 OR10V1Q8NGI7 309 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 ZDHHC11Q9H8X9 412 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 RTTNQ86VV8 2226 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 EYSQ5T1H1 3165 aa8.88□□□□□ -0.99
CD44-210ENST00000434472 TMEM210A6NLX4 147 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 K7N7A8 449 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 HSPB6O14558 160 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 HS3ST1O14792 307 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 SSSCA1O60232 199 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 DFFBO76075 338 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 F12P00748 615 aaPredicted RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 SERPINE2P07093 398 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 ZNF806P0C7X5 589 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 RAC2P15153 192 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms