RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SP1P08047 785 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 CST2P09228 141 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 AADACP22760 399 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 S100PP25815 95 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 TMEM33P57088 247 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 KIAA0141Q14154 515 aaPredicted RBP13.39□□□□□ -0.27
SCARF1-203ENST00000434376 ACTBL2Q562R1 376 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF766Q5HY98 468 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 ADAMTS17Q8TE56 1095 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 KCNJ16Q9NPI9 418 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 V9GYS6 101 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF816-ZNF321PA0A0X1KG74 233 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 IFNA2P01563 188 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 IGHEP01854 428 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 FCGR3AP08637 254 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 PET100P0DJ07 73 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 FKBP2P26885 142 aaKnown RBP13.39□□□□□ -0.27
SCARF1-203ENST00000434376 APLNRP35414 380 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 EIF5AP63241 154 aaKnown RBP13.39□□□□□ -0.27
SCARF1-203ENST00000434376 GGNBP1Q5YKI7 109 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 FDCSPQ8NFU4 85 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 PTX4Q96A99 478 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 NMES1Q9C002 83 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 RNF150Q9ULK6 438 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 UBE2J1Q9Y385 318 aaPredicted RBP13.39□□□□□ -0.27
SCARF1-203ENST00000434376 C5orf52A6NGY3 159 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 IFNA21P01568 189 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 CD46P15529 392 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 RAB5AP20339 215 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 PCBD1P61457 104 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 KCNMB1Q16558 191 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF826PQ6ZT77 177 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 ARRDC1Q8N5I2 433 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 ADGRG7Q96K78 797 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 C2orf50Q96LR7 162 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 SLC2A8Q9NY64 477 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 TREM2Q9NZC2 230 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 MEMO1Q9Y316 297 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 WNK2Q9Y3S1 2297 aa13.39□□□□□ -0.27
SCARF1-203ENST00000434376 TRGV5A0A0B4J1U4 118 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 TRAPPC2LH3BP13 241 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 MT-ND4LP03901 98 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 WT1P19544 449 aaPredicted RBP13.38□□□□□ -0.27
SCARF1-203ENST00000434376 DVL1P1P54792 670 aaPredicted RBP13.38□□□□□ -0.27
SCARF1-203ENST00000434376 GUK1Q16774 197 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 MDP1Q86V88 176 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 C15orf54Q8N8G6 183 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 BCO1Q9HAY6 547 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 TMEM100Q9NV29 134 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 TINAGQ9UJW2 476 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 SLC22A20A6NK97 555 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 CYTIPO60759 359 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF674Q2M3X9 581 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 SF3B5Q9BWJ5 86 aaKnown RBP13.38□□□□□ -0.27
SCARF1-203ENST00000434376 OR2J1Q9GZK6 312 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 SLC5A7Q9GZV3 580 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 KCNS2Q9ULS6 477 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 hCG_38984A0A1B0GV85 526 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF727A8MUV8 499 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 SERPINE3A8MV23 424 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 SCGNO76038 276 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 FPR2P25090 351 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 S100A2P29034 98 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 TMEM268Q5VZI3 342 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 KPTNQ9Y664 436 aa13.38□□□□□ -0.27
SCARF1-203ENST00000434376 PTPRQQ9UMZ3 2332 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 OR52M1Q8NGK5 317 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 CACFD1Q9UGQ2 172 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 KCNIP3Q9Y2W7 256 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 KIAA1549Q9HCM3 1950 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 CD300LBA8K4G0 201 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 KLRC4-KLRK1H3BQV0 150 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 GPR37O15354 613 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 CCL1P22362 96 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 EIF2S3P41091 472 aaKnown RBP13.37□□□□□ -0.27
SCARF1-203ENST00000434376 SULT1A1P50225 295 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 DEFA6Q01524 100 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 NAAAQ02083 359 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 CDPF1Q6NVV7 123 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 EDARADDQ8WWZ3 215 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 ERGIC1Q969X5 290 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 OR51M1Q9H341 326 aa13.37□□□□□ -0.27
SCARF1-203ENST00000434376 MYOZ1Q9NP98 299 aaPredicted RBP13.37□□□□□ -0.27
SCARF1-203ENST00000434376 CDIPTO14735 213 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 ATXN7O15265 892 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-203ENST00000434376 CST7O76096 145 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 OTX1P32242 354 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-203ENST00000434376 TMEM182Q6ZP80 229 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-203ENST00000434376 MKXQ8IYA7 352 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 OCSTAMPQ9BR26 566 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 CNTNAP3Q9BZ76 1288 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF286AQ9HBT8 521 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 MSL2Q9HCI7 577 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 SLC2A9Q9NRM0 540 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 MTCH1Q9NZJ7 389 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 SPRR3Q9UBC9 169 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 DUSP13Q9UII6 198 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 UBE2NP61088 152 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms