RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 MEDAGQ5VYS4 303 aa11.28□□□□□ -0.6
SMARCE1-205ENST00000431889 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
SMARCE1-205ENST00000431889 SAXO1Q8IYX7 474 aa11.28□□□□□ -0.6
SMARCE1-205ENST00000431889 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
SMARCE1-205ENST00000431889 CHST4Q8NCG5 386 aa11.28□□□□□ -0.6
SMARCE1-205ENST00000431889 OR13C5Q8NGS8 318 aa11.28□□□□□ -0.6
SMARCE1-205ENST00000431889 A0A087X0M5 115 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 A0A1B0GX30 115 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 A0A1W2PP11 408 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 SERPINE3A8MV23 424 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 E9PQ18 207 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 MTNR1BP49286 362 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 RSU1Q15404 277 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 PARP16Q8N5Y8 322 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 SUMF2Q8NBJ7 301 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 OR10X1Q8NGY0 326 aa11.27□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A18PA6NE21 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A16PA6NEW6 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A20PA6NIJ5 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A12PA8MX19 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A5PA8MXJ8 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 ATP5HO75947 161 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 IL1AP01583 271 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A15PP0C7V4 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A13PP0C7W8 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A14PP0C7W9 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 FAM90A24PP0C7X0 464 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 RAB3AP20336 220 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 SERPINA2P20848 420 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 C21orf33P30042 268 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 GBX2P52951 348 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 DEFB136Q30KP8 78 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 VAX1Q5SQQ9 334 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 OR2G6Q5TZ20 316 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 CCDC144NLQ6NUI1 221 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 KLHL30-AS1Q8NEE0 82 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 APH1BQ8WW43 257 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 RCC1LQ96I51 464 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 BARHL1Q9BZE3 327 aa11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 SIRT4Q9Y6E7 314 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-205ENST00000431889 MAGEA13PA6NCF6 341 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 TMEM212A6NML5 194 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 NCBP2LA6PVI3 153 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 ZNF736B4DX44 427 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 GEMIN2O14893 280 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 OR7C1O76099 320 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 CLIC3O95833 236 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 THBS3P49746 956 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 ETV1P50549 477 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 RPL23AP62750 156 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 MADCAM1Q13477 382 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 OR2W3Q7Z3T1 314 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 CREB3L1Q96BA8 519 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 DPCDQ9BVM2 203 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 ST3GAL6Q9Y274 331 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 ZNF281Q9Y2X9 895 aa11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 AMMECR1Q9Y4X0 333 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-205ENST00000431889 SLC31A2O15432 143 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 MAGEB3O15480 346 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 FADS2O95864 444 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 LIMS3P0CW19 117 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 LIMS4P0CW20 117 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 ATAD3CQ5T2N8 411 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 SYS1Q8N2H4 156 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 ZFP41Q8N8Y5 198 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 RHOXF1Q8NHV9 184 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 TFAP2CQ92754 450 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 JAM3Q9BX67 310 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 LOC100130705A0A1B0GUX0 176 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 A0A1W2PPK0 400 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 SNTNA6NMZ2 147 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 NPIPB11E5RHQ5 1161 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 SDCBPO00560 298 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 HSD17B6O14756 317 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 DDI2Q5TDH0 399 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 ELP2Q6IA86 826 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 SLC35E3Q7Z769 313 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 PRR18Q8N4B5 295 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 PXT1Q8NFP0 134 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 NEK7Q8TDX7 302 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 ARL11Q969Q4 196 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 MRPL48Q96GC5 212 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 RHOFQ9HBH0 211 aa11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-205ENST00000431889 RYR3Q15413 4870 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 IGHV1-3A0A0C4DH29 117 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 PNMA8CA0A1B0GUJ8 204 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 OOSP1A8MZH6 123 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 CCRL2O00421 344 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 LALBAP00709 142 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 RPLP1P05386 114 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 VHLP40337 213 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 LUMP51884 338 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 CD69Q07108 199 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 ZNF529Q6P280 563 aa11.23□□□□□ -0.61
SMARCE1-205ENST00000431889 OR10V1Q8NGI7 309 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms