RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GABRA2P47869 451 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 ATPAF1Q5TC12 328 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-206ENST00000431390 SLC35E4Q6ICL7 350 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF880Q6PDB4 577 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 PLET1Q6UQ28 207 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF782Q6ZMW2 699 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-206ENST00000431390 Q6ZPA2 131 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 MOB1BQ7L9L4 216 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 ASCC1Q8N9N2 400 aaKnown RBP15.23■□□□□ 0.03
HMGN1-206ENST00000431390 OR5H2Q8NGV7 314 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 PLPPR1Q8TBJ4 325 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 MAFIPQ8WZ33 124 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF665Q9H7R5 613 aa15.23■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF469Q96JG9 3925 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-206ENST00000431390 TFF1P04155 84 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 AMY2AP04746 511 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF735P0CB33 412 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 ATXN7L3Q14CW9 347 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-206ENST00000431390 ZMYND11Q15326 602 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 CHRFAM7AQ494W8 412 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 RSBN1Q5VWQ0 802 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF788Q6ZQV5 615 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 DEFB108BQ8NET1 73 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 OR56B4Q8NH76 319 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 SHARPINQ9H0F6 387 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 SLC2A8Q9NY64 477 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 MGAT4AQ9UM21 535 aa15.22■□□□□ 0.03
HMGN1-206ENST00000431390 HRNRQ86YZ3 2850 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-206ENST00000431390 IGKV1D-8A0A087WSZ0 117 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 KIR2DS1A0A191URI9 304 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 TMEM30CPA0ZSE6 113 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 K7N7A8 449 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 MGST3O14880 152 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 RP2O75695 350 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 ZNF205O95201 554 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 PMP2P02689 132 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 TCRBP04435 133 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 COL8A2P25067 703 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 KIR2DS4P43632 304 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 OR3A3P47888 321 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 CCR6P51684 374 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 ARPC4P59998 168 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 KIR2DS1Q14954 304 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 KCNJ8Q15842 424 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 ARRDC1Q8N5I2 433 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 OR51S1Q8NGJ8 323 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 OR5D13Q8NGL4 314 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 PRRT1Q99946 306 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 FAM234AQ9H0X4 552 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 MYOZ1Q9NP98 299 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-206ENST00000431390 SCP2D1Q9UJQ7 156 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 MAB21L2Q9Y586 359 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 NUBP2Q9Y5Y2 271 aa15.21■□□□□ 0.03
HMGN1-206ENST00000431390 NKX6-3A6NJ46 265 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 OVOL3O00110 214 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 GYPAP02724 150 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 IFNA6P05013 189 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 CDK10Q15131 360 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 RBMS2Q15434 407 aaKnown RBP15.2■□□□□ 0.02
HMGN1-206ENST00000431390 GRK1Q15835 563 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 IGFBPL1Q8WX77 278 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 CREB3L1Q96BA8 519 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 GAFA1Q96PS6 74 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 SLC6A7Q99884 636 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 MMP28Q9H239 520 aa15.2■□□□□ 0.02
HMGN1-206ENST00000431390 MBNL3Q9NUK0 354 aaKnown RBP15.2■□□□□ 0.02
HMGN1-206ENST00000431390 SIGLEC5O15389 551 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 NDUFA2O43678 99 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 TK1P04183 234 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 BTG1P62324 171 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 BTN2A1Q7KYR7 527 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 OVCH2Q7RTZ1 564 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 GLCCI1Q86VQ1 547 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 COQ2Q96H96 371 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 MARVELD1Q9BSK0 173 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 NECAP2Q9NVZ3 263 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 A0A1B0GVG6 124 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 TRDCB7Z8K6 153 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 TNFRSF13BO14836 293 aaPredicted RBP15.19■□□□□ 0.02
HMGN1-206ENST00000431390 NDUFB6O95139 128 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 DAOP14920 347 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 CDKN1AP38936 164 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 IL13RA1P78552 427 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 AESQ08117 197 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 KRBOX4Q5JUW0 171 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 PEG10Q86TG7 708 aaKnown RBP15.19■□□□□ 0.02
HMGN1-206ENST00000431390 TMEM17Q86X19 198 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 ZNRF1Q8ND25 227 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 UPRTQ96BW1 309 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 MED30Q96HR3 178 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 CCL13Q99616 98 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 NCOR1P1Q9H4R4 102 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 EHFQ9NZC4 300 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 TRAPPC2LQ9UL33 140 aa15.19■□□□□ 0.02
HMGN1-206ENST00000431390 LYNX1G3V0Z9 82 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 F12P00748 615 aaPredicted RBP15.18■□□□□ 0.02
HMGN1-206ENST00000431390 GSTT2P0CG29 244 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 LYNX1P0DP58 116 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 HLA-DRB3P79483 266 aa15.18■□□□□ 0.02
HMGN1-206ENST00000431390 IDO2Q6ZQW0 420 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms