RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 MOB3AQ96BX8 217 aa14.09□□□□□ -0.15
USHBP1-203ENST00000431146 RHOFQ9HBH0 211 aa14.09□□□□□ -0.15
USHBP1-203ENST00000431146 ATP23Q9Y6H3 246 aa14.09□□□□□ -0.15
USHBP1-203ENST00000431146 CRYM-AS1A6NIL9 109 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 RFPL4AA6NLU0 287 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 TRDCB7Z8K6 153 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 RFPL4AL1F8VTS6 287 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 IFNA2P01563 188 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 HOXB5P09067 269 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 SRSF4Q08170 494 aaKnown RBP14.08□□□□□ -0.16
USHBP1-203ENST00000431146 OPCMLQ14982 345 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 ABCA11PQ4W5N1 156 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 TEX261Q6UWH6 196 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 Q6ZS49 121 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 WFDC8Q8IUA0 241 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 SGPP2Q8IWX5 399 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 UBALD1Q8TB05 177 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 RBM14Q96PK6 669 aaKnown RBP14.08□□□□□ -0.16
USHBP1-203ENST00000431146 KLF2Q9Y5W3 355 aaPredicted RBP14.08□□□□□ -0.16
USHBP1-203ENST00000431146 U3KQ87 197 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 HMSDA8MTL9 139 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 C16orf97H3BN30 126 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 SH2D1BO14796 132 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 ATXN7O15265 892 aaPredicted RBP14.08□□□□□ -0.16
USHBP1-203ENST00000431146 ZNF250P15622 560 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 CD40P25942 277 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 GLRXP35754 106 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 HTR2BP41595 481 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 ZNF146Q15072 292 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 GSG1LQ6UXU4 331 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 PRR18Q8N4B5 295 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 TMEM171Q8WVE6 324 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 ASB13Q8WXK3 278 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 METTL8Q9H825 291 aaKnown RBP14.08□□□□□ -0.16
USHBP1-203ENST00000431146 HES4Q9HCC6 221 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 C1orf123Q9NWV4 160 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 COMMD9Q9P000 198 aa14.08□□□□□ -0.16
USHBP1-203ENST00000431146 POLEQ07864 2286 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 CACNA1DQ01668 2161 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 M0R233 179 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 KCNAB3O43448 404 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 HAND1O96004 215 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 CFDP00746 253 aaPredicted RBP14.07□□□□□ -0.16
USHBP1-203ENST00000431146 KLF3P57682 345 aaPredicted RBP14.07□□□□□ -0.16
USHBP1-203ENST00000431146 RBPJQ06330 500 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 C1orf174Q8IYL3 243 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 RTN4IP1Q8WWV3 396 aaPredicted RBP14.07□□□□□ -0.16
USHBP1-203ENST00000431146 OR10C1Q96KK4 312 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 CITED4Q96RK1 184 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 TLNRD1Q9H1K6 362 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 SLC2A9Q9NRM0 540 aa14.07□□□□□ -0.16
USHBP1-203ENST00000431146 TRGV8A0A0C4DH27 118 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 KIR2DS1A0A191URI9 304 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 PSPNO60542 156 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 PTBP3O95758 552 aaKnown RBP14.06□□□□□ -0.16
USHBP1-203ENST00000431146 IGHV3-13P01766 116 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 TK1P04183 234 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 KIR2DS4P43632 304 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 KIR2DS1Q14954 304 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 SRSF7Q16629 238 aaKnown RBP eCLIP14.06□□□□□ -0.16
USHBP1-203ENST00000431146 C3orf36Q3SXR2 165 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 TMUB2Q71RG4 321 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 ZNF546Q86UE3 836 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 ZNF680Q8NEM1 530 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 SECTM1Q8WVN6 248 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 GPHA2Q96T91 129 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 ARL6Q9H0F7 186 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 RASL12Q9NYN1 266 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 IGKV1D-13A0A0B4J2D9 117 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 SPRY3O43610 288 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 IGKV1-13P0DP09 117 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 TOR2AQ5JU69 321 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 SPIN3Q5JUX0 258 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 C11orf87Q6NUJ2 197 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 ACP7Q6ZNF0 438 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 IL1F10Q8WWZ1 152 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 KIRREL1Q96J84 757 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 MRPL37Q9BZE1 423 aaKnown RBP14.06□□□□□ -0.16
USHBP1-203ENST00000431146 MFFQ9GZY8 342 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 RIMS4Q9H426 269 aaPredicted RBP14.06□□□□□ -0.16
USHBP1-203ENST00000431146 RAB18Q9NP72 206 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 ITPR1Q14643 2758 aa14.06□□□□□ -0.16
USHBP1-203ENST00000431146 A0A0B4J2A0 478 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 GLAP06280 429 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 OR5AC1P0C628 307 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 S100A11P31949 105 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 ZNF880Q6PDB4 577 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 ZNF497Q6ZNH5 498 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 BOLLQ8N9W6 283 aaKnown RBP14.05□□□□□ -0.16
USHBP1-203ENST00000431146 LRRC29Q8WV35 223 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 RND1Q92730 232 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 MARC2Q969Z3 335 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 NAA60Q9H7X0 242 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 ELOVL5Q9NYP7 299 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 JKAMPQ9P055 326 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 TAAR3PQ9P1P4 343 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 SHPKQ9UHJ6 478 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 METRNQ9UJH8 293 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 TRBV6-6A0A0A6YYG2 114 aa14.05□□□□□ -0.16
USHBP1-203ENST00000431146 A0A1B0GWJ7 208 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms