RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 SULT4A1Q9BR01 284 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 LPAR3Q9UBY5 353 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 DAPK2Q9UIK4 370 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 SCOCQ9UIL1 159 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 KCNK7Q9Y2U2 307 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 PEX16Q9Y5Y5 336 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 A0A1W2PQ09 198 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 hADV38S2A0JD32 116 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 RNASEK-C17orf49H0YIS7 233 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 TMEM127O75204 238 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 MMP23AO75900 390 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 TOX4O94842 621 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 RBP4P02753 201 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 ZNF728P0DKX0 622 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 RANBP1P43487 201 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 SCAND1P57086 179 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 C17orf58Q2M2W7 97 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 MOGAT2Q3SYC2 334 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 CHRFAM7AQ494W8 412 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 PLAC9Q5JTB6 97 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 ATAD3CQ5T2N8 411 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 C9orf139Q6ZV77 190 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 C6orf201Q7Z4U5 140 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 VMO1Q7Z5L0 202 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 OR13A1Q8NGR1 328 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 NDNFQ8TB73 568 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 NANPQ8TBE9 248 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 SLC25A38Q96DW6 304 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 AJUBAQ96IF1 538 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 PCGF1Q9BSM1 259 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 BEX2Q9BXY8 128 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 RBM38Q9H0Z9 239 aaKnown RBP10.16□□□□□ -0.78
USP40-205ENST00000430158 METTL8Q9H825 291 aaKnown RBP10.16□□□□□ -0.78
USP40-205ENST00000430158 TAS2R3Q9NYW6 316 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 ONECUT1Q9UBC0 465 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 HSF4Q9ULV5 492 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 UBE2J1Q9Y385 318 aaPredicted RBP10.16□□□□□ -0.78
USP40-205ENST00000430158 SOX21Q9Y651 276 aaPredicted RBP10.16□□□□□ -0.78
USP40-205ENST00000430158 CEPT1Q9Y6K0 416 aa10.16□□□□□ -0.78
USP40-205ENST00000430158 TRAV39A0A0B4J263 110 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 FUOMA2VDF0 154 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 NPIPB11E5RHQ5 1161 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 FAM157CP0CG43 387 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 BLVRBP30043 206 aaPredicted RBP10.15□□□□□ -0.78
USP40-205ENST00000430158 GDNFP39905 211 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 SERPINB10P48595 397 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 VEGFCP49767 419 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 TMBIM6P55061 237 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 PRB3Q04118 309 aaPredicted RBP10.15□□□□□ -0.78
USP40-205ENST00000430158 SPCS2Q15005 226 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 UTF1Q5T230 341 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 IDNKQ5T6J7 187 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 METTL11BQ5VVY1 283 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 CLVS1Q8IUQ0 354 aaPredicted RBP10.15□□□□□ -0.78
USP40-205ENST00000430158 LGALS14Q8TCE9 139 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 BCL7BQ9BQE9 202 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 URM1Q9BTM9 101 aaKnown RBP10.15□□□□□ -0.78
USP40-205ENST00000430158 FAAP24Q9BTP7 215 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 SIRT7Q9NRC8 400 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 ZNF69Q9UC07 566 aa10.15□□□□□ -0.78
USP40-205ENST00000430158 MEIKINA0A087WXM9 373 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 TRBV6-6A0A0A6YYG2 114 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 TMEM30CPA0ZSE6 113 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 UBE2QL1A1L167 161 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 MCRIP1C9JLW8 97 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 C15orf65H3BRN8 121 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 H3BUI4 141 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 CA11O75493 328 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 NAPSAO96009 420 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 IGHV1-8P0DP01 117 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 HNF1AP20823 631 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 GUCA2AQ02747 115 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 KLRD1Q13241 179 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 RBM39Q14498 530 aaKnown RBP10.14□□□□□ -0.79
USP40-205ENST00000430158 OLFML2AQ68BL7 652 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 ZNF880Q6PDB4 577 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 BAIAP2L2Q6UXY1 529 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 CROCCP3Q8IVE0 287 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 CMTM4Q8IZR5 234 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 BCL6BQ8N143 479 aaPredicted RBP10.14□□□□□ -0.79
USP40-205ENST00000430158 OR56B1Q8NGI3 324 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 MRPL30Q8TCC3 161 aaKnown RBP10.14□□□□□ -0.79
USP40-205ENST00000430158 RAB2BQ8WUD1 216 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 ARHGAP5-AS1Q96IT6 56 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 ZNF714Q96N38 554 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 NEDD4LQ96PU5 975 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 PECRQ9BY49 303 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 DCSTAMPQ9H295 470 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 MBNL3Q9NUK0 354 aaKnown RBP10.14□□□□□ -0.79
USP40-205ENST00000430158 ING3Q9NXR8 418 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 ETAA1Q9NY74 926 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 OR6C3Q9NZP0 311 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 ABRACLQ9P1F3 81 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 NUP50Q9UKX7 468 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 SPATA2Q9UM82 520 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 COL6A5A8TX70 2615 aa10.14□□□□□ -0.79
USP40-205ENST00000430158 IGHV3OR16-10A0A075B7F0 116 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 TRGV10A0A0A0MS01 117 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms