RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 COX6A1P12074 109 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 BAXQ07812 192 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 CEACAM16Q2WEN9 425 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF506Q5JVG8 444 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 TVP23CQ96ET8 276 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 NIPSNAP3BQ9BS92 247 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
LINC00839-202ENST00000429940 SH2D2AQ9NP31 389 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 URGCP-MRPS24S4R325 110 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 SHANK1Q9Y566 2161 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 IFITM10A6NMD0 228 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 DNPH1O43598 174 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
LINC00839-202ENST00000429940 UMODP07911 640 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 S100A2P29034 98 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 CARD18P57730 90 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 TLE4Q04727 773 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF154Q13106 437 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 NMSQ5H8A3 153 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF468Q5VIY5 522 aaPredicted RBP12.9□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF610Q8N9Z0 462 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 NAT6Q93015 286 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 SIGLEC12Q96PQ1 595 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 DUSP23Q9BVJ7 150 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 DOK5Q9P104 306 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 DMRT1Q9Y5R6 373 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 MUC6Q6W4X9 2439 aa12.9□□□□□ -0.34
LINC00839-202ENST00000429940 LNP1A1A4G5 178 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 CLEC18AA5D8T8 446 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 ZNF716A6NP11 495 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 ZNF587BE7ETH6 402 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 WRBO00258 174 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 SCTP09683 121 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 RD3LP0DJH9 198 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 EDN3P14138 238 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 VDAC1P21796 283 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 PCBD1P61457 104 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 RPL23AP62750 156 aaKnown RBP12.9□□□□□ -0.35
LINC00839-202ENST00000429940 ID3Q02535 119 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 SP5Q6BEB4 398 aaPredicted RBP12.9□□□□□ -0.35
LINC00839-202ENST00000429940 Q6ZS49 121 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 YRDCQ86U90 279 aaKnown RBP12.9□□□□□ -0.35
LINC00839-202ENST00000429940 CLEC18CQ8NCF0 446 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 CLDND2Q8NHS1 167 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 RBMXL1Q96E39 390 aaKnown RBP12.9□□□□□ -0.35
LINC00839-202ENST00000429940 Q9N2K0 584 aa12.9□□□□□ -0.35
LINC00839-202ENST00000429940 DUXBA0A1W2PPF3 345 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 CHST1O43916 411 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 MMP9P14780 707 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 BCL3P20749 454 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 ERVFRD-1P60508 538 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
LINC00839-202ENST00000429940 CMTM1Q8IZ96 169 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 PLPPR1Q8TBJ4 325 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 ATP5SQ99766 215 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 SIRT7Q9NRC8 400 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 GAR1Q9NY12 217 aaKnown RBP12.89□□□□□ -0.35
LINC00839-202ENST00000429940 TCFL5Q9UL49 500 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 OTOGLQ3ZCN5 2332 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 ZNF292O60281 2723 aa12.89□□□□□ -0.35
LINC00839-202ENST00000429940 RIF1Q5UIP0 2472 aaKnown RBP12.89□□□□□ -0.35
LINC00839-202ENST00000429940 TGIF2-C20orf24A0A0A6YYL0 155 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 CXorf65A6NEN9 183 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 SLC22A20A6NK97 555 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 SLC34A2O95436 690 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 HBE1P02100 147 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 CEACAM1P13688 526 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 UCP1P25874 307 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FOXO1Q12778 655 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 PYY3Q5JQD4 70 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 OR2B11Q5JQS5 317 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 P4HA3Q7Z4N8 544 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 GGNQ86UU5 652 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 M1APQ8TC57 530 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A10PA6NDY2 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A18PA6NE21 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A16PA6NEW6 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A20PA6NIJ5 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A8PA6NJQ4 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A7PA6NKC0 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A22PA8MWA6 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A12PA8MX19 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A5PA8MXJ8 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A23PA8MXZ1 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 CXCL13O43927 109 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A15PP0C7V4 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A13PP0C7W8 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A14PP0C7W9 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FAM90A24PP0C7X0 464 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 FGF5P12034 268 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 HERPUD1Q15011 391 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 DPPA3Q6W0C5 159 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 SLC35E3Q7Z769 313 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 CCL28Q9NRJ3 127 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 HS3ST3B1Q9Y662 390 aa12.88□□□□□ -0.35
LINC00839-202ENST00000429940 HSPB6O14558 160 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms