RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 PPP1R2P9O14990 202 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 CCL2P13500 99 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 PRF1P14222 555 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 ACP1P24666 158 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 DYNLT3P51808 116 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 SURF2Q15527 256 aaPredicted RBP12.9□□□□□ -0.34
CACTIN-203ENST00000429344 FAM89BQ8N5H3 189 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 NRASP01111 189 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 CXCL1P09341 107 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
CACTIN-203ENST00000429344 PYY3Q5JQD4 70 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 OR10D3Q8NH80 312 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 Q96M66 194 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 HES7Q9BYE0 225 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 ZDHHC8Q9ULC8 765 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 IGSF23A1L1A6 192 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 ZNF705GA8MUZ8 300 aaPredicted RBP12.9□□□□□ -0.34
CACTIN-203ENST00000429344 SYNGR4O95473 234 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 CNOT4O95628 575 aaKnown RBP12.9□□□□□ -0.34
CACTIN-203ENST00000429344 FOLR2P14207 255 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 TMEM267Q0VDI3 215 aaPredicted RBP12.9□□□□□ -0.34
CACTIN-203ENST00000429344 MPV17LQ2QL34 196 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 IL17BQ9UHF5 180 aa12.9□□□□□ -0.34
CACTIN-203ENST00000429344 NOSIPQ9Y314 301 aaKnown RBP12.9□□□□□ -0.34
CACTIN-203ENST00000429344 ARHGAP21Q5T5U3 1957 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 TERTO14746 1132 aaKnown RBP12.89□□□□□ -0.35
CACTIN-203ENST00000429344 SLC16A14Q7RTX9 510 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 ZNF610Q8N9Z0 462 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 ZNF845Q96IR2 970 aaPredicted RBP12.89□□□□□ -0.35
CACTIN-203ENST00000429344 ZPBPQ9BS86 351 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 DCAF16Q9NXF7 216 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 TUBD1Q9UJT1 453 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 AKAP6Q13023 2319 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 MMP9P14780 707 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 ARG2P78540 354 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 OSR2Q8N2R0 312 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 CCDC71LQ8N9Z2 235 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 Q8WTZ3 238 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 NTNG2Q96CW9 530 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 TRAV39A0A0B4J263 110 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 C3orf85A0A1B0GTC6 90 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 CEACAM18A8MTB9 384 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 ZIC3O60481 467 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 MRPL33O75394 65 aaKnown RBP12.89□□□□□ -0.35
CACTIN-203ENST00000429344 ZNF266Q14584 549 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 ABHD3Q8WU67 409 aa12.89□□□□□ -0.35
CACTIN-203ENST00000429344 RBM14Q96PK6 669 aaKnown RBP12.89□□□□□ -0.35
CACTIN-203ENST00000429344 STRAPQ9Y3F4 350 aaKnown RBP12.89□□□□□ -0.35
CACTIN-203ENST00000429344 IGKV1-27A0A075B6S5 117 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 MSTNO14793 375 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 GATCO43716 136 aaKnown RBP12.88□□□□□ -0.35
CACTIN-203ENST00000429344 CYTIPO60759 359 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
CACTIN-203ENST00000429344 IAPPP10997 89 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 SRD5A2P31213 254 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 NPBWR2P48146 333 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 RPS16P62249 146 aaKnown RBP12.88□□□□□ -0.35
CACTIN-203ENST00000429344 ENDOGQ14249 297 aaKnown RBP12.88□□□□□ -0.35
CACTIN-203ENST00000429344 BATFQ16520 125 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 ZNF880Q6PDB4 577 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 SNX22Q96L94 193 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 NUDT16L1Q9BRJ7 211 aaKnown RBP12.88□□□□□ -0.35
CACTIN-203ENST00000429344 SLC7A10Q9NS82 523 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 HSF4Q9ULV5 492 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 A0A096LPE4 126 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 A0A1W2PPZ6 126 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 C9orf172C9J069 976 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 ZNF32P17041 273 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
CACTIN-203ENST00000429344 OR1C1Q15619 314 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 CEACAM16Q2WEN9 425 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 ATP1A1-AS1Q5TC04 95 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 HIST2H3PS2Q5TEC6 136 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 TBC1D26Q86UD7 250 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 FADS6Q8N9I5 356 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 WASF3Q9UPY6 502 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 ZNF318Q5VUA4 2279 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 OR2V1Q8NHB1 315 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 SRXN1Q9BYN0 137 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 BCO1Q9HAY6 547 aa12.88□□□□□ -0.35
CACTIN-203ENST00000429344 SOX15O60248 233 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 PPYP01298 95 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 MBP02144 154 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 ERVFRD-1P60508 538 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 CNN3Q15417 329 aaKnown RBP12.87□□□□□ -0.35
CACTIN-203ENST00000429344 C3AR1Q16581 482 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 TCAPO15273 167 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 CHST1O43916 411 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 ECI1P42126 302 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 GAPTQ8N292 157 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 GINS3Q9BRX5 216 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 DEFB127Q9H1M4 99 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 IGKV1-12A0A0C4DH73 117 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 TSTD3H0UI37 97 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 PHOX2AO14813 284 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 IGKV1D-12P01611 117 aa12.87□□□□□ -0.35
CACTIN-203ENST00000429344 RAC3P60763 192 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms