RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SH2D1BO14796 132 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 CRYAAP02489 173 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 IGKV1-13P0DP09 117 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 KITLGP21583 273 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 LUMP51884 338 aaPredicted RBP8.8□□□□□ -1
HDAC9-210ENST00000428307 UCP3P55916 312 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 TMEM187Q14656 261 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 EIF2S3LQ2VIR3 472 aaKnown RBP8.8□□□□□ -1
HDAC9-210ENST00000428307 RGS7BPQ6MZT1 257 aaPredicted RBP8.8□□□□□ -1
HDAC9-210ENST00000428307 GFRALQ6UXV0 394 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 MEX3BQ6ZN04 569 aaKnown RBP8.8□□□□□ -1
HDAC9-210ENST00000428307 ZNF565Q8N9K5 539 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 POC1AQ8NBT0 407 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 OR2Z1Q8NG97 314 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 GTF3AQ92664 365 aaKnown RBP8.8□□□□□ -1
HDAC9-210ENST00000428307 SNRNP40Q96DI7 357 aaKnown RBP8.8□□□□□ -1
HDAC9-210ENST00000428307 KIRREL1Q96J84 757 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 TP53RKQ96S44 253 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 RSRP1Q9BUV0 290 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 SFXN3Q9BWM7 321 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 CXXC4Q9H2H0 198 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 TMEM210A6NLX4 147 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 HSD17B6O14756 317 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 PSPNO60542 156 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 IFNA21P01568 189 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 TDGF1P3P51864 188 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 ZNF345Q14585 488 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 ZNF146Q15072 292 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 SRSF7Q16629 238 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-210ENST00000428307 PCSK4Q6UW60 755 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 ZNF818PQ6ZRF7 136 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 GAPTQ8N292 157 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 GALNT14Q96FL9 552 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 SLC5A7Q9GZV3 580 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 ASF1BQ9NVP2 202 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 TRAPPC2LQ9UL33 140 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 MSRB2Q9Y3D2 182 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 ZGRF1Q86YA3 2104 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 RELNP78509 3460 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 A0A0G2JNJ9 132 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 LINC00862A6NCI5 91 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 MSGN1A6NI15 193 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 F5H0A9 414 aaPredicted RBP8.79□□□□□ -1
HDAC9-210ENST00000428307 MPPED1O15442 326 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 TNFSF12O43508 249 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 SCGB1D2O95969 90 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 HAND1O96004 215 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 IL15RAQ13261 267 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 MBNL2Q5VZF2 373 aaKnown RBP8.79□□□□□ -1
HDAC9-210ENST00000428307 WDR82Q6UXN9 313 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 FAM169BQ8N8A8 192 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 RELL2Q8NC24 303 aaPredicted RBP8.79□□□□□ -1
HDAC9-210ENST00000428307 OR10J5Q8NHC4 309 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 SCARB1Q8WTV0 552 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 ST8SIA2Q92186 375 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 IFT22Q9H7X7 185 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 RHOFQ9HBH0 211 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 CCL28Q9NRJ3 127 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 Q9UFV3 132 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 C3orf85A0A1B0GTC6 90 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 TEX46H3BTG2 121 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 BCL2L11O43521 198 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 B3GALNT1O75752 331 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 GLAP06280 429 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 CTXN2P0C2S0 81 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 TUBG1P23258 451 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 FAM74A1Q5RGS3 127 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 LIAT1Q6ZQX7 453 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 CCDC71LQ8N9Z2 235 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 OR1S1Q8NH92 325 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 LHFPL5Q8TAF8 219 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 MSI2Q96DH6 328 aaKnown RBP8.79□□□□□ -1
HDAC9-210ENST00000428307 SUCNR1Q9BXA5 334 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 TUBG2Q9NRH3 451 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 OR1A1Q9P1Q5 309 aa8.79□□□□□ -1
HDAC9-210ENST00000428307 ERRFI1Q9UJM3 462 aaPredicted RBP8.79□□□□□ -1
HDAC9-210ENST00000428307 TRBV6-7A0A0A0MS04 114 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 MEX3AA1L020 520 aaKnown RBP8.78□□□□□ -1
HDAC9-210ENST00000428307 ATP6V1G2-DDX39BF2Z307 99 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 TUSC2O75896 110 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 NMBP08949 121 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 HOXD4P09016 255 aaPredicted RBP8.78□□□□□ -1
HDAC9-210ENST00000428307 KCNJ3P48549 501 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 ESCO2Q56NI9 601 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 PRSS54Q6PEW0 395 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 ZNF497Q6ZNH5 498 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 TBC1D26Q86UD7 250 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 LDLRAD3Q86YD5 345 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 GALNT11Q8NCW6 608 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 DMRTA2Q96SC8 542 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 RAXQ9Y2V3 346 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 MEMO1Q9Y316 297 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 ROS1P08922 2347 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 TRBV6-6A0A0A6YYG2 114 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 HSPA12AO43301 675 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 PTBP3O95758 552 aaKnown RBP8.78□□□□□ -1
HDAC9-210ENST00000428307 HLA-DRB3P79483 266 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 AESQ08117 197 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 ZNF880Q6PDB4 577 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 FIP1L1Q6UN15 594 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms