RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 GSTK1Q9Y2Q3 226 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 FAM32AQ9Y421 112 aaKnown RBP6.84□□□□□ -1.31
LSG1-202ENST00000427461 MYCBP2O75592 4640 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 DNAH5Q8TE73 4624 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 LOC102724200A0A096LPH7 203 aaPredicted RBP6.83□□□□□ -1.32
LSG1-202ENST00000427461 TRAV39A0A0B4J263 110 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 ARPC1BO15143 372 aaKnown RBP6.83□□□□□ -1.32
LSG1-202ENST00000427461 IL1AP01583 271 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 HLA-DRB1P01911 266 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 TTRP02766 147 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 ZP3P21754 424 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 NUDT2P50583 147 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 BLVRAP53004 296 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 TSPAN31Q12999 210 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 UBE2V2Q15819 145 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 GUCA2BQ16661 112 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 OR14K1Q8NGZ2 314 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 C2CD4CQ8TF44 421 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 ANP32BQ92688 251 aaKnown RBP6.83□□□□□ -1.32
LSG1-202ENST00000427461 OTULINQ96BN8 352 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 SELENOKQ9Y6D0 94 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 CDH10Q9Y6N8 788 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 V9GYS6 101 aa6.83□□□□□ -1.32
LSG1-202ENST00000427461 TRBV2A0A0J9YWF9 115 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 IGLL5B9A064 214 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 NPIPB11E5RHQ5 1161 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 CXCR6O00574 342 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 HSPB6O14558 160 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 SH2D1BO14796 132 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 MITFO75030 526 aaPredicted RBP6.82□□□□□ -1.32
LSG1-202ENST00000427461 ZNF44P15621 663 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 SSTR5P35346 364 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 VHLP40337 213 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 APOFQ13790 326 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 SPIN3Q5JUX0 258 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 TMEM179BQ7Z7N9 219 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 LAX1Q8IWV1 398 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 GNPDA2Q8TDQ7 276 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 MRGPRDQ8TDS7 321 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.82□□□□□ -1.32
LSG1-202ENST00000427461 C7orf34Q96L11 122 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 DGCR6LQ9BY27 220 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 TTTY10Q9BZA0 68 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 CNOT2Q9NZN8 540 aaKnown RBP6.82□□□□□ -1.32
LSG1-202ENST00000427461 KIF25Q9UIL4 384 aa6.82□□□□□ -1.32
LSG1-202ENST00000427461 MEIKINA0A087WXM9 373 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 A0A1B0GTI1 187 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 PRR32B1ATL7 298 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 SLC33A1O00400 549 aaPredicted RBP6.81□□□□□ -1.32
LSG1-202ENST00000427461 GADD45GO95257 159 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 TRBV12-3P01733 135 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 TRGV3P03979 118 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 IFNA4P05014 189 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 CSN2P05814 226 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 RBMY1A1P0DJD3 496 aaKnown RBP6.81□□□□□ -1.32
LSG1-202ENST00000427461 EGR2P11161 476 aaPredicted RBP6.81□□□□□ -1.32
LSG1-202ENST00000427461 NCK1P16333 377 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 CTRB1P17538 263 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 EDN2P20800 178 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 RBMS2Q15434 407 aaKnown RBP6.81□□□□□ -1.32
LSG1-202ENST00000427461 CTRB2Q6GPI1 263 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 LIN54Q6MZP7 749 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 Q6P435 159 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 SLC15A3Q8IY34 581 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 Q8IYB0 196 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 RDH10Q8IZV5 341 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 TMEM217Q8N7C4 229 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 ZNF565Q8N9K5 539 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 OR2K2Q8NGT1 345 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 UBALD1Q8TB05 177 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 TSEN15Q8WW01 171 aaKnown RBP6.81□□□□□ -1.32
LSG1-202ENST00000427461 WDR89Q96FK6 387 aaPredicted RBP6.81□□□□□ -1.32
LSG1-202ENST00000427461 FAM103A1Q9BTL3 118 aaKnown RBP6.81□□□□□ -1.32
LSG1-202ENST00000427461 TSSK6Q9BXA6 273 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 OR51V1Q9H2C8 321 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 LINC00574Q9H8X3 128 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 HMG20AQ9NP66 347 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 CMTM6Q9NX76 183 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 IL20Q9NYY1 176 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 GTF2A1LQ9UNN4 478 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 TP53TG1Q9Y2A0 90 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 NUBP2Q9Y5Y2 271 aa6.81□□□□□ -1.32
LSG1-202ENST00000427461 ACOD1A6NK06 481 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 MRASO14807 208 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 SLC31A2O15432 143 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 C21orf33P30042 268 aaPredicted RBP6.8□□□□□ -1.32
LSG1-202ENST00000427461 CRIP2P52943 208 aaPredicted RBP6.8□□□□□ -1.32
LSG1-202ENST00000427461 TCTAP57738 103 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 ACTBP60709 375 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 VSNL1P62760 191 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 DEFA5Q01523 94 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 FAT1Q14517 4588 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 C5orf64Q2M2E5 130 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 ACTBL2Q562R1 376 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 HDXQ7Z353 690 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 RP9Q8TA86 221 aaKnown RBP6.8□□□□□ -1.32
LSG1-202ENST00000427461 BORCS8Q96FH0 119 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 C7orf26Q96N11 449 aa6.8□□□□□ -1.32
LSG1-202ENST00000427461 KRT84Q9NSB2 600 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms