RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 EXTL2Q9UBQ6 330 aa12.75□□□□□ -0.37
COL11A1-204ENST00000427239 MEIKINA0A087WXM9 373 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 A0A1W2PPH5 198 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 TMEM30CPA0ZSE6 113 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 ODAMA1E959 279 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 CNIH2Q6PI25 160 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 BAIAP2L2Q6UXY1 529 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 CIARTQ8N365 385 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-204ENST00000427239 OR4M1Q8NGD0 313 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 OR6Q1Q8NGQ2 317 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 CMSS1Q9BQ75 279 aaKnown RBP12.74□□□□□ -0.37
COL11A1-204ENST00000427239 AUNIPQ9H7T9 357 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 AK3Q9UIJ7 227 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 MRPS7Q9Y2R9 242 aaKnown RBP12.74□□□□□ -0.37
COL11A1-204ENST00000427239 MED13LQ71F56 2210 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 CYSRT1A8MQ03 144 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 ENSAO43768 121 aaKnown RBP12.74□□□□□ -0.37
COL11A1-204ENST00000427239 NAPSAO96009 420 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 HLA-DQB1P01920 261 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 CD3GP09693 182 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 PPIAL4GP0DN37 164 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 GZMHP20718 246 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 TAS2R20P59543 309 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 ARFRP1Q13795 201 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 TMEM200BQ69YZ2 307 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 CYB5R2Q6BCY4 276 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 CORO2AQ92828 525 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 COX4I2Q96KJ9 171 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 C12orf4Q9NQ89 552 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 ING3Q9NXR8 418 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 KIF25Q9UIL4 384 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
COL11A1-204ENST00000427239 TRGV10A0A0A0MS01 117 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 TRAV20A0A0B4J274 112 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 KIR2DS1A0A191URI9 304 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 A0A1W2PQ09 198 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 TMEM235A6NFC5 223 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 FABP12A6NFH5 140 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 IGHV4-31P0DP07 118 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 GATA3P23771 443 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 PAX2Q02962 417 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 CR1LQ2VPA4 569 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 OLFML2AQ68BL7 652 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 RTN4RL2Q86UN3 420 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 IZUMO1Q8IYV9 350 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 DTX3Q8N9I9 347 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 DYRK2Q92630 601 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 MSI2Q96DH6 328 aaKnown RBP12.73□□□□□ -0.37
COL11A1-204ENST00000427239 C18orf12Q96KH6 178 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 C19orf12Q9NSK7 152 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 TRAPPC2LQ9UL33 140 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 UBE2J1Q9Y385 318 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-204ENST00000427239 DOCK11Q5JSL3 2073 aa12.73□□□□□ -0.37
COL11A1-204ENST00000427239 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 IGHV2-70DA0A0C4DH43 119 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 C22orf46C9J442 243 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 SMAD7O15105 426 aaKnown RBP12.72□□□□□ -0.37
COL11A1-204ENST00000427239 PRSS3P35030 304 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 GNG2P59768 71 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 SPANXN2Q5MJ10 180 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 BTNL3Q6UXE8 466 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 FAM185AQ8N0U4 392 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 BORCS5Q969J3 196 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 DACT3Q96B18 629 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-204ENST00000427239 LPAR2Q9HBW0 351 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 CHMP1AQ9HD42 196 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-204ENST00000427239 TAS2R3Q9NYW6 316 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 MGAT4AQ9UM21 535 aa12.72□□□□□ -0.37
COL11A1-204ENST00000427239 TGFAP01135 160 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 FOSL1P15407 271 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 PTBP1P26599 531 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL11A1-204ENST00000427239 ETV6P41212 452 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 TRAT1Q6PIZ9 186 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 C1orf122Q6ZSJ8 110 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 TRAPPC6BQ86SZ2 158 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 CCDC190Q86UF4 302 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 OR4K15Q8NH41 348 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 MRPL30Q8TCC3 161 aaKnown RBP12.71□□□□□ -0.37
COL11A1-204ENST00000427239 TMEM186Q96B77 213 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 SOSTQ9BQB4 213 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 MMP26Q9NRE1 261 aa12.71□□□□□ -0.37
COL11A1-204ENST00000427239 MBNL3Q9NUK0 354 aaKnown RBP12.71□□□□□ -0.37
COL11A1-204ENST00000427239 hCG_1809904A0A1W2PP81 198 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 A0A1W2PPE2 198 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 A0A1W2PR64 198 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 A0A1W2PRV1 198 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 DTYMKP23919 212 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 CBX5P45973 191 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 DVL1P1P54792 670 aaPredicted RBP12.71□□□□□ -0.38
COL11A1-204ENST00000427239 IL18Q14116 193 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 SRSF7Q16629 238 aaKnown RBP eCLIP12.71□□□□□ -0.38
COL11A1-204ENST00000427239 C6orf183Q5T699 404 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 PYHIN1Q6K0P9 492 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 MOB1BQ7L9L4 216 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 GLCCI1Q86VQ1 547 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 CCDC107Q8WV48 283 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 ABHD1Q96SE0 405 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 GAL3ST2Q9H3Q3 398 aa12.71□□□□□ -0.38
COL11A1-204ENST00000427239 SCPEP1Q9HB40 452 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms