RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GHRHP01286 108 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 PCBP3P57721 371 aaKnown RBP12.77□□□□□ -0.36
PTPN13-203ENST00000427191 TAS2R60P59551 318 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 FAM27D1Q5T7N8 215 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 PWWP2BQ6NUJ5 590 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 WDR74Q6RFH5 385 aaPredicted RBP12.77□□□□□ -0.36
PTPN13-203ENST00000427191 RBM14Q96PK6 669 aaKnown RBP12.77□□□□□ -0.36
PTPN13-203ENST00000427191 CNTD2Q9H8S5 307 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 MIOXQ9UGB7 285 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 ARHGEF17Q96PE2 2063 aaPredicted RBP12.77□□□□□ -0.36
PTPN13-203ENST00000427191 LINC00862A6NCI5 91 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 KCNMB1Q16558 191 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 DTD1Q8TEA8 209 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 DYNLRB2Q8TF09 96 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 RAB33BQ9H082 229 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 CLEC5AQ9NY25 188 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 ISXQ2M1V0 245 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 FUT9Q9Y231 359 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 OR2W5A6NFC9 320 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 OR4P4Q8NGL7 312 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 NUBPLQ8TB37 319 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 OR4C46A6NHA9 309 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 SNURFLB1AK76 121 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 PLPP3O14495 311 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 PRR35P0CG20 571 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 TNFSF10P50591 281 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 PTP4A1Q93096 173 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF117Q03924 483 aa12.77□□□□□ -0.37
PTPN13-203ENST00000427191 LEUTXA8MZ59 168 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 H3BQ15 152 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 FAM157CP0CG43 387 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 Q6ZNB5 142 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 CALHM1Q8IU99 346 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 SELENOTP62341 195 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 FLYWCH2Q96CP2 140 aaKnown RBP12.76□□□□□ -0.37
PTPN13-203ENST00000427191 WDR34Q96EX3 536 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF385DQ9H6B1 395 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 SS18L1O75177 396 aaPredicted RBP12.76□□□□□ -0.37
PTPN13-203ENST00000427191 PLPPR5Q32ZL2 321 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 ANKRD33Q7Z3H0 272 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 KCNE3Q9Y6H6 103 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 CSN3P07498 182 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 OR4D9Q8NGE8 314 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 LHFPL5Q8TAF8 219 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 ABHD1Q96SE0 405 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 A0A1W2PS18 150 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 CFDP00746 253 aaPredicted RBP12.76□□□□□ -0.37
PTPN13-203ENST00000427191 TMEM255AQ5JRV8 349 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 FXYD1O00168 92 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 IGSF11Q5DX21 431 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 ASB10Q8WXI3 467 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 ZG16BQ96DA0 208 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 FAM206AQ9NX38 181 aa12.76□□□□□ -0.37
PTPN13-203ENST00000427191 TMEFF2Q9UIK5 374 aaPredicted RBP12.76□□□□□ -0.37
PTPN13-203ENST00000427191 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF774Q6NX45 483 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 ZFP64Q9NPA5 681 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 MGPP08493 103 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF83P51522 516 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 FADS6Q8N9I5 356 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 ASCL3Q9NQ33 180 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 DOK5Q9P104 306 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 HIGD1AQ9Y241 93 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 A0A1W2PQD3 144 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 GABRA6Q16445 453 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 PAM16Q9Y3D7 125 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 DNAL4O96015 105 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF32P17041 273 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 POM121Q96HA1 1249 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 WDR13Q9H1Z4 485 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 PTPRZ1P23471 2315 aaPredicted RBP12.75□□□□□ -0.37
PTPN13-203ENST00000427191 A0A1B0GV72 72 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 C7orf77A4D0Y5 90 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 WFDC5Q8TCV5 224 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 SPTY2D1-AS1A0A0U1RR47 76 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 CD3EP07766 207 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF735P0CB33 412 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 ETHE1O95571 254 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 GAPDHP04406 335 aaKnown RBP12.75□□□□□ -0.37
PTPN13-203ENST00000427191 CEACAM5P06731 702 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 LRRC75BQ2VPJ9 315 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF383Q8NA42 475 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 CLN8Q9UBY8 286 aa12.75□□□□□ -0.37
PTPN13-203ENST00000427191 IGHV3-64DA0A0J9YX35 117 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 PPYP01298 95 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 OR5M9Q8NGP3 310 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 OR4X1Q8NH49 305 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 ASB5Q8WWX0 329 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 OPN4Q9UHM6 478 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 DDX60LQ5H9U9 1706 aaKnown RBP12.74□□□□□ -0.37
PTPN13-203ENST00000427191 BCL2P10415 239 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 VN1R17PQ8TDU5 208 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 TRAF4Q9BUZ4 470 aaPredicted RBP12.74□□□□□ -0.37
PTPN13-203ENST00000427191 RBFOX2O43251 390 aaKnown RBP eCLIP12.74□□□□□ -0.37
PTPN13-203ENST00000427191 TMEM183AQ8IXX5 376 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 RNF122Q9H9V4 155 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms