RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 MFSD11O43934 449 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 OXTP01178 125 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 GCGP01275 180 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 SERPINE1P05121 402 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 THRAP10827 490 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 NEFHP12036 1026 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CYBAP13498 195 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 HOXB8P17481 243 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CELP19835 753 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CD9P21926 228 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 TUBG1P23258 451 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CRABP2P29373 138 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PEX19P40855 299 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PSMD8P48556 350 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 AQP5P55064 265 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 TAS2R43P59537 309 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 DNAJB13P59910 316 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 TPI1P60174 286 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 NAA20P61599 178 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 LCN2P80188 198 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 MGAT3Q09327 533 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 ADIGQ0VDE8 80 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 OR1Q1Q15612 314 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 C5orf64Q2M2E5 130 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 KRTAP13-2Q52LG2 175 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 ACSBG2Q5FVE4 666 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 KPRPQ5T749 579 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PRR9Q5T870 116 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 N4BP2L1Q5TBK1 243 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 SYPL2Q5VXT5 272 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 MFSD14CQ5VZR4 134 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PDPK2PQ6A1A2 396 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 DEGS2Q6QHC5 323 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 SPINT4Q6UDR6 99 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 EPGNQ6UW88 154 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CASP12Q6UXS9 341 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 NDUFAF7Q7L592 441 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PID1Q7Z2X4 250 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 VTCN1Q7Z7D3 282 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 SETD3Q86TU7 594 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 C10orf107Q8IVU9 208 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CTAGE3PQ8IX95 158 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF101Q8IZC7 436 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 UMODL1-AS1Q8N2C9 162 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 MIR7-3HGQ8N6C7 128 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 WDR31Q8NA23 367 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 TMEM104Q8NE00 496 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 OR2Z1Q8NG97 314 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 OR5T3Q8NGG3 340 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 DNAJB3Q8WWF6 145 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 DNAJC9Q8WXX5 260 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CMTM5Q96DZ9 223 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 WDR34Q96EX3 536 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 SMARCD1Q96GM5 515 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 Q96MT0 163 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 RDH12Q96NR8 316 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 IP6K3Q96PC2 410 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 KLF6Q99612 283 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PAIP2Q9BPZ3 127 aaKnown RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 AGMATQ9BSE5 352 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 SFXN3Q9BWM7 321 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 ULBP1Q9BZM6 244 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 DRC3Q9H069 523 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 RGCCQ9H4X1 137 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF442Q9H7R0 627 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CRLF2Q9HC73 371 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 FBXO8Q9NRD0 319 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 TUBG2Q9NRH3 451 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 TREX1Q9NSU2 369 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 TMEM100Q9NV29 134 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 TMEM216Q9P0N5 145 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CES1P1Q9UKY3 287 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 NDRG2Q9UN36 371 aaKnown RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 STK38LQ9Y2H1 464 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 DOCK6Q96HP0 2047 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 CCDC88CQ9P219 2028 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 NUP214P35658 2090 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PLXNA2O75051 1894 aa1.33□□□□□ -2.2
PTPRC-208ENST00000427110 NUP210Q8TEM1 1887 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-208ENST00000427110 PCNTO95613 3336 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 DNAH12Q6ZR08 3092 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 NINQ8N4C6 2090 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 A0A0A6YYD5 115 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ARPC4-TTLL3A0A0A6YYG9 625 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 LOC100653049A0A140TA62 436 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 CXorf51AA0A1B0GTR3 108 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 LOC285095A0A1B0GVY8 99 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MYBPHLA2RUH7 354 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 TRPC5OSA6NMA1 111 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 H0YJX3 145 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 M0QZ92 97 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 KCNK1O00180 336 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 DFFAO00273 331 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 PSPHP1O15172 72 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 DENRO43583 198 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 CTNSO60931 367 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 UPK1BO75841 260 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 PIAS1O75925 651 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 KRT34O76011 436 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 PTTG1O95997 202 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms