RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 RSRP1Q9BUV0 290 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 TRAV39A0A0B4J263 110 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 CCL21O00585 134 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 CXCL2P19875 107 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 ASCL1P50553 236 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 LY6DQ14210 128 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 PCSK4Q6UW60 755 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 MOB1BQ7L9L4 216 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 OR10Z1Q8NGY1 313 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 RAB18Q9NP72 206 aa22.31■■□□□ 1.16
LDB1-202ENST00000425280 FXYD6-FXYD2A0A087WZ82 144 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 RFPL4AA6NLU0 287 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 HMSDA8MTL9 139 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 RFPL4AL1F8VTS6 287 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 TUSC2O75896 110 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 DIRAS3O95661 229 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 TFF1P04155 84 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 EGR1P18146 543 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 PHLDA2Q53GA4 152 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 ITLN1Q8WWA0 313 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 SLC2A9Q9NRM0 540 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 C5orf51A6NDU8 294 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 SRRM5B3KS81 715 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 ADAP1O75689 374 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 CFHR2P36980 270 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 GSG1LQ6UXU4 331 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 KDF1Q8NAX2 398 aaPredicted RBP22.3■■□□□ 1.16
LDB1-202ENST00000425280 RTN4IP1Q8WWV3 396 aaPredicted RBP22.3■■□□□ 1.16
LDB1-202ENST00000425280 CABLES2Q9BTV7 478 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 PCDHB10Q9UN67 800 aa22.3■■□□□ 1.16
LDB1-202ENST00000425280 C13orf42A0A1B0GVH6 325 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 MOGAT3Q86VF5 341 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 NAA60Q9H7X0 242 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 HEXA-AS1Q9H8Q6 139 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 TRAPPC2LQ9UL33 140 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 ATRXP46100 2492 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 PLCE1Q9P212 2302 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.29■■□□□ 1.16
LDB1-202ENST00000425280 OR11L1Q8NGX0 322 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 WIPI2Q9Y4P8 454 aa22.29■■□□□ 1.16
LDB1-202ENST00000425280 IFNL4K9M1U5 179 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 ARPC5O15511 151 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 ATP6V1G1O75348 118 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 IGHV1-46P01743 117 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 SFTPCP11686 197 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 FGL1Q08830 312 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 PPP1R1CQ8WVI7 109 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 KIRREL1Q96J84 757 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 MBNL3Q9NUK0 354 aaKnown RBP22.28■■□□□ 1.16
LDB1-202ENST00000425280 METRNQ9UJH8 293 aa22.28■■□□□ 1.16
LDB1-202ENST00000425280 TRBV6-7A0A0A0MS04 114 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 KCNJ3P48549 501 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 ADIPOQQ15848 244 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 COMMD9Q9P000 198 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 CACNA1AO00555 2505 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 IGKV1D-13A0A0B4J2D9 117 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 L7N2F9 121 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 IGKV1-13P0DP09 117 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 CHRNB4P30926 498 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 GNRHRP30968 328 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 GATA4P43694 442 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 COL10A1Q03692 680 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 GCSAMQ8N6F7 178 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 GALNT14Q96FL9 552 aa22.27■■□□□ 1.16
LDB1-202ENST00000425280 MPTX1A8MV57 137 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 SNAPC5O75971 98 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 OR3A1P47881 315 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 LRRC37A5PQ49AS3 106 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 CD177Q8N6Q3 437 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 OR10J5Q8NHC4 309 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 SECTM1Q8WVN6 248 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 NMES1Q9C002 83 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 METTL8Q9H825 291 aaKnown RBP22.26■■□□□ 1.15
LDB1-202ENST00000425280 NGBQ9NPG2 151 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 KCNIP3Q9Y2W7 256 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 TMEM30CPA0ZSE6 113 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 FAM90A27PA6NNH2 459 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 OR4A8P0C604 315 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 TNFAIP6P98066 277 aaPredicted RBP22.26■■□□□ 1.15
LDB1-202ENST00000425280 ADAM5Q6NVV9 412 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 H1FOOQ8IZA3 346 aaPredicted RBP22.26■■□□□ 1.15
LDB1-202ENST00000425280 BOLLQ8N9W6 283 aaKnown RBP22.26■■□□□ 1.15
LDB1-202ENST00000425280 RDH8Q9NYR8 311 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 IL19Q9UHD0 177 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 ZDHHC8Q9ULC8 765 aa22.26■■□□□ 1.15
LDB1-202ENST00000425280 OR5AC1P0C628 307 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 PSG2P11465 335 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 TMEM187Q14656 261 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 SP6Q3SY56 376 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 FBXL19-AS1Q494R0 122 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 SLC35E4Q6ICL7 350 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 FAM90A1Q86YD7 464 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 CCDC71LQ8N9Z2 235 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 IL1F10Q8WWZ1 152 aa22.25■■□□□ 1.15
LDB1-202ENST00000425280 NPIPB11E5RHQ5 1161 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 LHBP01229 141 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 HOXB5P09067 269 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 PRDX2P32119 198 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 ADORA2A-AS1P86434 159 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 HMGN3Q15651 99 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms