RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 E9PI62 339 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 CCL24O00175 119 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 ZFPL1O95159 310 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 RPLP1P05386 114 aaKnown RBP11.75□□□□□ -0.53
ATG4B-209ENST00000425239 HTR1AP08908 422 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 TMEM225BP0DP42 221 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 DBTP11182 482 aaKnown RBP11.75□□□□□ -0.53
ATG4B-209ENST00000425239 C21orf33P30042 268 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-209ENST00000425239 SNRPGP62308 76 aaKnown RBP11.75□□□□□ -0.53
ATG4B-209ENST00000425239 CFHR3Q02985 330 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 ZNF816Q0VGE8 651 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-209ENST00000425239 ZNF691Q5VV52 312 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 SERPINA12Q8IW75 414 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 TMEM104Q8NE00 496 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 TFAP2CQ92754 450 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 DPF1Q92782 380 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 ST6GALNAC6Q969X2 333 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 EAF1Q96JC9 268 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-209ENST00000425239 C4orf36Q96KX1 117 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 ISG20L2Q9H9L3 353 aaKnown RBP11.75□□□□□ -0.53
ATG4B-209ENST00000425239 AASSQ9UDR5 926 aa11.75□□□□□ -0.53
ATG4B-209ENST00000425239 AMMECR1Q9Y4X0 333 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-209ENST00000425239 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 IGHV1-3A0A0C4DH29 117 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 A0A1W2PPE3 182 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 C15orf65H3BRN8 121 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 J3QLW9 94 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 HSPB6O14558 160 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 SULT1B1O43704 296 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 RAMP3O60896 148 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 ZNF19P17023 458 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 GABRB1P18505 474 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 SSTR5P35346 364 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 CDX1P47902 265 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-209ENST00000425239 BNIP1Q12981 228 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 HES1Q14469 280 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 KIR2DS1Q14954 304 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 FAM53AQ6NSI3 398 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-209ENST00000425239 LCNL1Q6ZST4 164 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 SLC35E3Q7Z769 313 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 TGIF2LXQ8IUE1 241 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 ACBD7Q8N6N7 88 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 Q8N9W7 124 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 OR5D14Q8NGL3 314 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 MRGPRDQ8TDS7 321 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 LGALS12Q96DT0 336 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 RBMXL1Q96E39 390 aaKnown RBP11.74□□□□□ -0.53
ATG4B-209ENST00000425239 CENPNQ96H22 339 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-209ENST00000425239 NR1H4Q96RI1 486 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-209ENST00000425239 BARHL1Q9BZE3 327 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 ABCG5Q9H222 651 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 U3KQK5 164 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 STARD9Q9P2P6 4700 aa11.74□□□□□ -0.53
ATG4B-209ENST00000425239 GABRPO00591 440 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 ALPLP05186 524 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 VHLP40337 213 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 GLP1RP43220 463 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 GPR12P47775 334 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 LUMP51884 338 aaPredicted RBP11.73□□□□□ -0.53
ATG4B-209ENST00000425239 DCTN2Q13561 401 aaKnown RBP11.73□□□□□ -0.53
ATG4B-209ENST00000425239 IL13RA2Q14627 380 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 PNLIPRP3Q17RR3 467 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 DEFB136Q30KP8 78 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 PAN3Q58A45 887 aaKnown RBP11.73□□□□□ -0.53
ATG4B-209ENST00000425239 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 UNQ9370/PRO34162Q6UXP9 181 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 LHFPL3Q86UP9 236 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 IZUMO1Q8IYV9 350 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 LINC00311Q8N616 119 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 OR51A2Q8NGJ7 313 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 IFT22Q9H7X7 185 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 NEK6Q9HC98 313 aa11.73□□□□□ -0.53
ATG4B-209ENST00000425239 NUDT19A8MXV4 375 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 HSD17B6O14756 317 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 OCM2P0CE71 109 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 OCMP0CE72 109 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-209ENST00000425239 KCNJ3P48549 501 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 GNG10P50151 68 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 SLC35B1P78383 322 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 FHL3Q13643 280 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 KIAA0141Q14154 515 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-209ENST00000425239 GALEQ14376 348 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 ZSCAN26Q16670 478 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 LTC4SQ16873 150 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 MEDAGQ5VYS4 303 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 FOXRED2Q8IWF2 684 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 SYS1Q8N2H4 156 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 SUMF2Q8NBJ7 301 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 RGP1Q92546 391 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-209ENST00000425239 PDCD1LG2Q9BQ51 273 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 LIN7CQ9NUP9 197 aaKnown RBP11.72□□□□□ -0.53
ATG4B-209ENST00000425239 ZMAT5Q9UDW3 170 aaKnown RBP11.72□□□□□ -0.53
ATG4B-209ENST00000425239 TENM2Q9NT68 2774 aa11.72□□□□□ -0.53
ATG4B-209ENST00000425239 IGHV3-72A0A0B4J1Y9 119 aa11.71□□□□□ -0.53
ATG4B-209ENST00000425239 ZNF736B4DX44 427 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-209ENST00000425239 AP4M1O00189 453 aa11.71□□□□□ -0.53
ATG4B-209ENST00000425239 GAPDHP04406 335 aaKnown RBP11.71□□□□□ -0.53
ATG4B-209ENST00000425239 HCKP08631 526 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms