RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CR1P17927 2039 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 C22orf46C9J442 243 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 GSTP1P09211 210 aaKnown RBP11.12□□□□□ -0.63
PRPF39-202ENST00000424478 LMO4P61968 165 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 IGSF11Q5DX21 431 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 ZNF57Q68EA5 555 aaPredicted RBP11.12□□□□□ -0.63
PRPF39-202ENST00000424478 LINC00596Q86U02 117 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 SMIM4Q8WVI0 70 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 LEAP2Q969E1 77 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 TRIM63Q969Q1 353 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.12□□□□□ -0.631e-8■■■■■ 27.5
PRPF39-202ENST00000424478 FAM90A10PA6NDY2 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A18PA6NE21 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A16PA6NEW6 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A20PA6NIJ5 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A8PA6NJQ4 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A7PA6NKC0 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A22PA8MWA6 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A12PA8MX19 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A5PA8MXJ8 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A23PA8MXZ1 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 PMP2P02689 132 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A15PP0C7V4 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A13PP0C7W8 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A14PP0C7W9 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM90A24PP0C7X0 464 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 PPP5CP53041 499 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 S100ZQ8WXG8 99 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 IFT22Q9H7X7 185 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 SPACA1Q9HBV2 294 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 IFT46Q9NQC8 304 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 MMP26Q9NRE1 261 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 SERPINE3A8MV23 424 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 MMP23AO75900 390 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 CD3DP04234 171 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 GSTT2P0CG29 244 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 GSTT2BP0CG30 244 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 GIFP27352 417 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 GNB2P62879 340 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 LRRC10Q5BKY1 277 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 ATPAF1Q5TC12 328 aaPredicted RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 WDR25Q64LD2 544 aaPredicted RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 STEAP3Q658P3 488 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 GLCCI1Q86VQ1 547 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 LYSMD2Q8IV50 215 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 OR8B3Q8NGG8 313 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 OR1L1Q8NH94 360 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 RBMXL1Q96E39 390 aaKnown RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 OR8B2Q96RD0 313 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 BARX1Q9HBU1 254 aaPredicted RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 BEX4Q9NWD9 120 aaPredicted RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 ODAMA1E959 279 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 A6NJ64 397 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 GABARAPH6UMI1 98 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 MGST3O14880 152 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 NAPSAO96009 420 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 IGHV2-5P01817 119 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 LPLP06858 475 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 MELTFP08582 738 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 RPL31P62899 125 aaKnown RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 RBM39Q14498 530 aaKnown RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 DNM1P46Q6ZS02 220 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 PDZD9Q8IXQ8 264 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 MUC20Q8N307 709 aaPredicted RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 SPICQ8N5J4 248 aa11.11□□□□□ -0.63
PRPF39-202ENST00000424478 NEIL1Q96FI4 390 aaPredicted RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 WDR12Q9GZL7 423 aaKnown RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 TINAGL1Q9GZM7 467 aaPredicted RBP11.11□□□□□ -0.63
PRPF39-202ENST00000424478 VWC2LB2RUY7 222 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 SMAD7O15105 426 aaKnown RBP11.1□□□□□ -0.63
PRPF39-202ENST00000424478 P2RX3P56373 397 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 PITPNAQ00169 270 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 BEST4Q8NFU0 473 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 MED30Q96HR3 178 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 KIRREL1Q96J84 757 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 ZNRD1Q9P1U0 126 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 BET1O15155 118 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 METTL11BQ5VVY1 283 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 TRIQKQ629K1 86 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 TMEM200BQ69YZ2 307 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 ZNF782Q6ZMW2 699 aaPredicted RBP11.1□□□□□ -0.63
PRPF39-202ENST00000424478 SSBP3Q9BWW4 388 aaPredicted RBP11.1□□□□□ -0.63
PRPF39-202ENST00000424478 PARP12Q9H0J9 701 aaKnown RBP11.1□□□□□ -0.63
PRPF39-202ENST00000424478 MXRA5Q9NR99 2828 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 TMEM30CPA0ZSE6 113 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 RBBP9O75884 186 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 SCGNO76038 276 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 HRH1P35367 487 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 FAM189A2Q15884 450 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 TMEM155Q4W5P6 130 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 NLRC3Q7RTR2 1065 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 OR10V1Q8NGI7 309 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 TAF9BQ9HBM6 251 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 MTFP1Q9UDX5 166 aa11.1□□□□□ -0.63
PRPF39-202ENST00000424478 HIVEP1P15822 2718 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 IGKV1-6A0A0C4DH72 117 aa11.09□□□□□ -0.63
PRPF39-202ENST00000424478 C12orf77C9JDV5 145 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms