RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 LGALS4P56470 323 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 BAMBIQ13145 260 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 DYNC1I2Q13409 638 aaKnown RBP12.88□□□□□ -0.35
BRAT1-202ENST00000421712 UNC119Q13432 240 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 RSBN1Q5VWQ0 802 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-202ENST00000421712 SLC35E4Q6ICL7 350 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 C9orf139Q6ZV77 190 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 USP43Q70EL4 1123 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 MRGPRDQ8TDS7 321 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 YIPF6Q96EC8 236 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 CENPOQ9BU64 300 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 A0A0U1RQK1 487 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 TRIM64CA6NLI5 447 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 ZNF729A6NN14 1252 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-202ENST00000421712 NOTOA8MTQ0 251 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 AIPO00170 330 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 CLPXO76031 633 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 VENTXO95231 258 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 PAHP00439 452 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 SMIM18P0DKX4 95 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 OMGP23515 440 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 CDK2P24941 298 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 BLVRBP30043 206 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-202ENST00000421712 LSM3P62310 102 aaKnown RBP12.87□□□□□ -0.35
BRAT1-202ENST00000421712 QRFPP83859 136 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 PRAMEF5Q5TYX0 476 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 GDPGP1Q6ZNW5 385 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 ZNF48Q96MX3 618 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-202ENST00000421712 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 NICN1Q9BSH3 213 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 MRPS26Q9BYN8 205 aaKnown RBP12.87□□□□□ -0.35
BRAT1-202ENST00000421712 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 LIN7BQ9HAP6 207 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 PLEKHJ1Q9NW61 149 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 RCC2Q9P258 522 aaKnown RBP12.87□□□□□ -0.35
BRAT1-202ENST00000421712 RAB22AQ9UL26 194 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 TRAPPC2LQ9UL33 140 aa12.87□□□□□ -0.35
BRAT1-202ENST00000421712 A0A0B4J203 849 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 TMEM272A0A1B0GTI8 110 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 KBTBD11-OT1A0A1B0GTJ5 212 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 ARG1P05089 322 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 GLAP06280 429 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 SLC2A2P11168 524 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-202ENST00000421712 NFYBP25208 207 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 SAA4P35542 130 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 HILS1P60008 231 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 LTC4SQ16873 150 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 OR52W1Q6IF63 320 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 HCP5Q6MZN7 132 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 OR13A1Q8NGR1 328 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 OR4K15Q8NH41 348 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 DYRK2Q92630 601 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 LPAR5Q9H1C0 372 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 TNFRSF19Q9NS68 423 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 DAPK2Q9UIK4 370 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 MXRA5Q9NR99 2828 aa12.86□□□□□ -0.35
BRAT1-202ENST00000421712 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 TRIM77I1YAP6 450 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 SOCS1O15524 211 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 MMP23AO75900 390 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 MT-ND4P03905 459 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 GZMHP20718 246 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 VEGFCP49767 419 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 MIDNQ504T8 468 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 NR2C2APQ86WQ0 139 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 RFESDQ8TAC1 157 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 FAAP24Q9BTP7 215 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 FUNDC2Q9BWH2 189 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 TMEM133Q9H2Q1 129 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 CALYQ9NYX4 217 aa12.85□□□□□ -0.35
BRAT1-202ENST00000421712 CUBNO60494 3623 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 RNF212BA8MTL3 300 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 HOXA3O43365 443 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-202ENST00000421712 FBP1P09467 338 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 CHATP28329 748 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 PAX5Q02548 391 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 C17orf58Q2M2W7 97 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 IDNKQ5T6J7 187 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 SFXN4Q6P4A7 337 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 ABHD12Q8N2K0 398 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 OR56B1Q8NGI3 324 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 TMEM158Q8WZ71 300 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 SULT4A1Q9BR01 284 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 CLEC7AQ9BXN2 247 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 CHMP1AQ9HD42 196 aaPredicted RBP12.84□□□□□ -0.35
BRAT1-202ENST00000421712 IDI2-AS1Q9NZ38 188 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 FBLN5Q9UBX5 448 aa12.84□□□□□ -0.35
BRAT1-202ENST00000421712 A0A0A6YYD4 124 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 IGHV2-26A0A0B4J1V2 119 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 METTL21EPA6NDL7 271 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 DNAJC9-AS1A6NH13 148 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms