RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 GPR61Q9BZJ8 451 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 ISG20L2Q9H9L3 353 aaKnown RBP6.35□□□□□ -1.39
VIM-202ENST00000421459 OR6C3Q9NZP0 311 aa6.35□□□□□ -1.39
VIM-202ENST00000421459 DSCAML1Q8TD84 2053 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 IGHV3-43A0A0B4J1X8 118 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 IGHV1-3A0A0C4DH29 117 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 DAPL1A0PJW8 107 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 OR4C45A6NMZ5 311 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 NPIPB11E5RHQ5 1161 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 E9PI62 339 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 J3QRE1 110 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 IL1AP01583 271 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 MT-ND2P03891 347 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 ISG15P05161 165 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 HCKP08631 526 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 HTR1AP08908 422 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 IGHV3-43DP0DP04 118 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 GPR12P47775 334 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 F2RL1P55085 397 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 SLC35B1P78383 322 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 MADCAM1Q13477 382 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 GPR50Q13585 617 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 KISS1Q15726 138 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 PNLIPRP3Q17RR3 467 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 RSBN1Q5VWQ0 802 aaPredicted RBP6.34□□□□□ -1.39
VIM-202ENST00000421459 TEX38Q6PEX7 206 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 SATL1Q86VE3 508 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 ZDHHC13Q8IUH4 622 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 SAXO1Q8IYX7 474 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 Q8N6K4 173 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 Q8N9W7 124 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 OR51A2Q8NGJ7 313 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 OR10X1Q8NGY0 326 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 CNIH3Q8TBE1 160 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 CCDC107Q8WV48 283 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 PELI1Q96FA3 418 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 C4orf36Q96KX1 117 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 GABARAPL1Q9H0R8 117 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 ZCCHC4Q9H5U6 513 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 PLSCR3Q9NRY6 295 aa6.34□□□□□ -1.39
VIM-202ENST00000421459 AMMECR1Q9Y4X0 333 aaPredicted RBP6.34□□□□□ -1.39
VIM-202ENST00000421459 TENM2Q9NT68 2774 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 SAC3D1A6NKF1 404 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 SEC14L6B5MCN3 397 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 CCRL2O00421 344 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 GABRPO00591 440 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 HSD17B6O14756 317 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 SLC16A6O15403 523 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 SLC31A2O15432 143 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 FGF16O43320 207 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 RAMP3O60896 148 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 CIB2O75838 187 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 LY86O95711 162 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 HOXB6P17509 224 aaKnown RBP6.33□□□□□ -1.4
VIM-202ENST00000421459 C21orf33P30042 268 aaPredicted RBP6.33□□□□□ -1.4
VIM-202ENST00000421459 RAB7AP51149 207 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 ALKBH1Q13686 389 aaKnown RBP6.33□□□□□ -1.4
VIM-202ENST00000421459 EBI3Q14213 229 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 KIR2DS1Q14954 304 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 ZNF260Q3ZCT1 412 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 ZNF691Q5VV52 312 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 FDX2Q6P4F2 183 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 OVCH2Q7RTZ1 564 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 C5orf24Q7Z6I8 188 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 LHFPL3Q86UP9 236 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 SBSPONQ8IVN8 264 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 FOXRED2Q8IWF2 684 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 OR8H3Q8N146 312 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 ZNF565Q8N9K5 539 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 SUMF2Q8NBJ7 301 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 CHST4Q8NCG5 386 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 OR8J1Q8NGP2 316 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 OR5M8Q8NGP6 311 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 HAVCR2Q8TDQ0 301 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 TNFAIP8L1Q8WVP5 186 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 ORAI1Q96D31 301 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 OR5B12Q96R08 314 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 PDCD1LG2Q9BQ51 273 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 ABCG5Q9H222 651 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 KLK15Q9H2R5 256 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 LINC00574Q9H8X3 128 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 GNB4Q9HAV0 340 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 PCDHB16Q9NRJ7 776 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 OAZ3Q9UMX2 235 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 CSMD3Q7Z407 3707 aa6.33□□□□□ -1.4
VIM-202ENST00000421459 C3orf84H3BNL1 204 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 C15orf65H3BRN8 121 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 AP4M1O00189 453 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 SULT1B1O43704 296 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 ZFPL1O95159 310 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 CDRT1O95170 752 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 HTR3BO95264 441 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 GAPDHP04406 335 aaKnown RBP6.32□□□□□ -1.4
VIM-202ENST00000421459 FASP25445 335 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 CDX1P47902 265 aaPredicted RBP6.32□□□□□ -1.4
VIM-202ENST00000421459 SOX2P48431 317 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 MTNR1BP49286 362 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 CCR9P51686 369 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 CFHR3Q02985 330 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 ZNF816Q0VGE8 651 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms