RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 FAM76BQ5HYJ3 339 aa13.75□□□□□ -0.21
CTSB-203ENST00000420692 BTNL8Q6UX41 500 aa13.75□□□□□ -0.21
CTSB-203ENST00000420692 FAM185AQ8N0U4 392 aa13.75□□□□□ -0.21
CTSB-203ENST00000420692 UBAC2Q8NBM4 344 aa13.75□□□□□ -0.21
CTSB-203ENST00000420692 NANOS1Q8WY41 292 aaKnown RBP13.75□□□□□ -0.21
CTSB-203ENST00000420692 PLK3Q9H4B4 646 aa13.75□□□□□ -0.21
CTSB-203ENST00000420692 FAM96BQ9Y3D0 163 aa13.75□□□□□ -0.21
CTSB-203ENST00000420692 MED6O75586 246 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 LYZL6O75951 148 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 IDH3GP51553 393 aaPredicted RBP13.74□□□□□ -0.21
CTSB-203ENST00000420692 NHLH2Q02577 135 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 IL13RA2Q14627 380 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 ZNF324BQ6AW86 544 aaPredicted RBP13.74□□□□□ -0.21
CTSB-203ENST00000420692 LINC00596Q86U02 117 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 PUSL1Q8N0Z8 303 aaKnown RBP13.74□□□□□ -0.21
CTSB-203ENST00000420692 CACNA1GO43497 2377 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 KIR2DS1A0A191URI9 304 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 J3QT63 122 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 HSD17B6O14756 317 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 ST8SIA3O43173 380 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 GPR137BO60478 399 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 SLC34A2O95436 690 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 CD82P27701 267 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 KIR2DS4P43632 304 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 EIF5AP63241 154 aaKnown RBP13.74□□□□□ -0.21
CTSB-203ENST00000420692 KIR2DS1Q14954 304 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 TBC1D28Q2M2D7 210 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 SPIN3Q5JUX0 258 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 IGFL2Q6UWQ7 119 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 IL34Q6ZMJ4 242 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 ADAT1Q9BUB4 502 aaKnown RBP13.74□□□□□ -0.21
CTSB-203ENST00000420692 NKX6-2Q9C056 277 aaPredicted RBP13.74□□□□□ -0.21
CTSB-203ENST00000420692 TLNRD1Q9H1K6 362 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 IFT22Q9H7X7 185 aa13.74□□□□□ -0.21
CTSB-203ENST00000420692 FBXO9Q9UK97 447 aaPredicted RBP13.74□□□□□ -0.21
CTSB-203ENST00000420692 TRAV39A0A0B4J263 110 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 NUDT19A8MXV4 375 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 CDS2O95674 445 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 MUC1P15941 1255 aaPredicted RBP13.73□□□□□ -0.21
CTSB-203ENST00000420692 ERVK11-1P61568 191 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 PPP1CBP62140 327 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 GABRA6Q16445 453 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 P4HA3Q7Z4N8 544 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 SCCPDHQ8NBX0 429 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 RHOFQ9HBH0 211 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 SPACA1Q9HBV2 294 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 UBE2J1Q9Y385 318 aaPredicted RBP13.73□□□□□ -0.21
CTSB-203ENST00000420692 POMT1Q9Y6A1 747 aa13.73□□□□□ -0.21
CTSB-203ENST00000420692 IGHV3-64DA0A0J9YX35 117 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 ATF4P18848 351 aaPredicted RBP13.72□□□□□ -0.21
CTSB-203ENST00000420692 P2RY1P47900 373 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 CAV2P51636 162 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 GPR157Q5UAW9 335 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 ZNF565Q8N9K5 539 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 PLPPR1Q8TBJ4 325 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 TRIB1Q96RU8 372 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 PARP12Q9H0J9 701 aaKnown RBP13.72□□□□□ -0.21
CTSB-203ENST00000420692 RIMS4Q9H426 269 aaPredicted RBP13.72□□□□□ -0.21
CTSB-203ENST00000420692 NBEAQ8NFP9 2946 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 C9JQL5 133 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 F12P00748 615 aaPredicted RBP13.72□□□□□ -0.21
CTSB-203ENST00000420692 SELEP16581 610 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 UCP1P25874 307 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 NMSQ5H8A3 153 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 KIAA2026Q5HYC2 2103 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 EIF5AL1Q6IS14 154 aaKnown RBP13.72□□□□□ -0.21
CTSB-203ENST00000420692 FAM214BQ7L5A3 538 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 SLC25A40Q8TBP6 338 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 UQCC1Q9NVA1 299 aa13.72□□□□□ -0.21
CTSB-203ENST00000420692 PTPRBP23467 1997 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 H0YL77 283 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 DEGS1O15121 323 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 TNFSF12O43508 249 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 PGLYRP1O75594 196 aaPredicted RBP13.71□□□□□ -0.21
CTSB-203ENST00000420692 CTXN2P0C2S0 81 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 KIR2DL2P43627 348 aaPredicted RBP13.71□□□□□ -0.21
CTSB-203ENST00000420692 ASCL1P50553 236 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 PSG7Q13046 419 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 CXorf66Q5JRM2 361 aaPredicted RBP13.71□□□□□ -0.21
CTSB-203ENST00000420692 ODF3L1Q8IXM7 274 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 LYPD6BQ8NI32 183 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 TSNAXQ99598 290 aaKnown RBP13.71□□□□□ -0.21
CTSB-203ENST00000420692 PARP11Q9NR21 331 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 CARHSP1Q9Y2V2 147 aaKnown RBP13.71□□□□□ -0.21
CTSB-203ENST00000420692 INTS1Q8N201 2190 aaKnown RBP13.71□□□□□ -0.21
CTSB-203ENST00000420692 SVILO95425 2214 aa13.71□□□□□ -0.21
CTSB-203ENST00000420692 ADAM20O43506 726 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 POLR2GP62487 172 aaKnown RBP eCLIP13.71□□□□□ -0.22
CTSB-203ENST00000420692 SRPXP78539 464 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 HLA-DRB3P79483 266 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 ZNF695Q8IW36 515 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 H1FOOQ8IZA3 346 aaPredicted RBP13.71□□□□□ -0.22
CTSB-203ENST00000420692 C9orf106Q8NAJ2 232 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 BOD1Q96IK1 185 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 KIRREL1Q96J84 757 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 GINS3Q9BRX5 216 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 TREM1Q9NP99 234 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 OR1A1Q9P1Q5 309 aa13.71□□□□□ -0.22
CTSB-203ENST00000420692 LRP5LA4QPB2 252 aa13.7□□□□□ -0.22
CTSB-203ENST00000420692 FAM24AA6NFZ4 105 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms