RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SHOXO15266 292 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 NXPH2O95156 264 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 HOXC12P31275 282 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 IL15RAQ13261 267 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 SPRNQ5BIV9 151 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 FBXW12Q6X9E4 464 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 Q6ZR03 302 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 PLPPR1Q8TBJ4 325 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 RBPMSQ93062 196 aaKnown RBP7.46□□□□□ -1.21
SNCA-206ENST00000420646 WNT2BQ93097 391 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 ZC4H2Q9NQZ6 224 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 AUP1Q9Y679 476 aa7.46□□□□□ -1.21
SNCA-206ENST00000420646 ITPR1Q14643 2758 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 A6NLC8 198 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 OR2H2O95918 312 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 GLP1RP43220 463 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 MRPL49Q13405 166 aaKnown RBP7.46□□□□□ -1.22
SNCA-206ENST00000420646 RTP5Q14D33 572 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 SURF2Q15527 256 aaPredicted RBP7.46□□□□□ -1.22
SNCA-206ENST00000420646 OR8G1Q15617 311 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 TUSC1Q2TAM9 212 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 ZNF474Q6S9Z5 364 aaPredicted RBP7.46□□□□□ -1.22
SNCA-206ENST00000420646 SLC35G3Q8N808 338 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 SNIP1Q8TAD8 396 aaKnown RBP7.46□□□□□ -1.22
SNCA-206ENST00000420646 ABHD17AQ96GS6 310 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 CYTL1Q9NRR1 136 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 PLSCR2Q9NRY7 297 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 RCC2Q9P258 522 aaKnown RBP7.46□□□□□ -1.22
SNCA-206ENST00000420646 IGSF10Q6WRI0 2623 aa7.46□□□□□ -1.22
SNCA-206ENST00000420646 IGHV1-18A0A0C4DH31 117 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 hCG_1807616A0A1W2PRN6 198 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 OR5B21A6NL26 309 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 PSPNO60542 156 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 IGKV3-15P01624 115 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 MBPP02686 304 aaPredicted RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 TK1P04183 234 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 PAN3Q58A45 887 aaKnown RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 TMEM268Q5VZI3 342 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 PCSK4Q6UW60 755 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 TBC1D26Q86UD7 250 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 PDZD9Q8IXQ8 264 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 MSI2Q96DH6 328 aaKnown RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 PIK3IP1Q96FE7 263 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 RASL12Q9NYN1 266 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 KCNIP3Q9Y2W7 256 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 MFSD2BA6NFX1 497 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 TIMM8AO60220 97 aaPredicted RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 CGAP01215 116 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 BMP5P22003 454 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 CTAG1AP78358 180 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 FAM27E3Q08E93 113 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 IL24Q13007 206 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 ZNF345Q14585 488 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 RPL7L1Q6DKI1 246 aaKnown RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 Q6P435 159 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 PRSS54Q6PEW0 395 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 INO80CQ6PI98 192 aaPredicted RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 OR51H1Q8NH63 302 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 ASB13Q8WXK3 278 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 S100PBPQ96BU1 408 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 RBMXL1Q96E39 390 aaKnown RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 PLPPR2Q96GM1 343 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 USB1Q9BQ65 265 aaKnown RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 RTL8AQ9BWD3 113 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 SLC5A7Q9GZV3 580 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 MAGT1Q9H0U3 335 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 PLSCR4Q9NRQ2 329 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 TREM2Q9NZC2 230 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 ERRFI1Q9UJM3 462 aaPredicted RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 PROCRQ9UNN8 238 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 C3orf85A0A1B0GTC6 90 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 J3QT63 122 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 MPPED1O15442 326 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 FBXO24O75426 580 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 CBR1P16152 277 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 CTRB1P17538 263 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 COX5AP20674 150 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 CYCSP99999 105 aaKnown RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 SNTB1Q13884 538 aaKnown RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 CTRB2Q6GPI1 263 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 SAXO1Q8IYX7 474 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 CISD2Q8N5K1 135 aaKnown RBP7.45□□□□□ -1.22
SNCA-206ENST00000420646 ERGIC1Q969X5 290 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 GLRX2Q9NS18 164 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 KIF25Q9UIL4 384 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 NUP50Q9UKX7 468 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 RFNGQ9Y644 331 aa7.45□□□□□ -1.22
SNCA-206ENST00000420646 CHD3Q12873 2000 aaKnown RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 GCN1Q92616 2671 aaKnown RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 MAP1AP78559 2803 aaPredicted RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 NKX2-6A6NCS4 301 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 AHRRA9YTQ3 701 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 TRDCB7Z8K6 153 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 TRIM77I1YAP6 450 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 ATF4P18848 351 aaPredicted RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 TAGLNQ01995 201 aaKnown RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 MPV17LQ2QL34 196 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 FAM76BQ5HYJ3 339 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 Q6ZS92 163 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms