RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 GTF2F2P13984 249 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 NFYBP25208 207 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 MPV17LQ2QL34 196 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 HLA-DRB5Q30154 266 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 SLC22A6Q4U2R8 563 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 Q6ZTK2 550 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 NRG4Q8WWG1 115 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 MYDGFQ969H8 173 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 MUL1Q969V5 352 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 KIRREL1Q96J84 757 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 MND1Q9BWT6 205 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 PRSS22Q9GZN4 317 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 MMP27Q9H306 513 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 SCN3BQ9NY72 215 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 IDI2-AS1Q9NZ38 188 aa13.24□□□□□ -0.29
LINC00404-201ENST00000418660 MRPS28Q9Y2Q9 187 aaKnown RBP13.24□□□□□ -0.29
LINC00404-201ENST00000418660 PKD1L1Q8TDX9 2849 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 A0A1W2PP11 408 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 NPIPB11E5RHQ5 1161 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 PTGES3LE9PB15 166 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 LY6LH3BQJ8 138 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 PIN1P1O15428 100 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 IL1AP01583 271 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 MAS1P04201 325 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 BRS3P32247 399 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 ARHGDIBP52566 201 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 AQP4P55087 323 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 JAGN1Q8N5M9 183 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 KLHDC1Q8N7A1 406 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 OR10A7Q8NGE5 316 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 OR9G1Q8NH87 305 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 MRGPRDQ8TDS7 321 aa13.23□□□□□ -0.29
LINC00404-201ENST00000418660 MRPS24Q96EL2 167 aaKnown RBP13.23□□□□□ -0.29
LINC00404-201ENST00000418660 OOSP1A8MZH6 123 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 GZMHP20718 246 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 MAPK3P27361 379 aaPredicted RBP13.22□□□□□ -0.29
LINC00404-201ENST00000418660 GABPB1Q06547 395 aaPredicted RBP13.22□□□□□ -0.29
LINC00404-201ENST00000418660 C2orf68Q2NKX9 166 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 UTF1Q5T230 341 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 ATAD3CQ5T2N8 411 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 TPTE2P1Q5T6R2 138 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 GLIPR1L1Q6UWM5 242 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 SLC16A12Q6ZSM3 486 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 LYPD6Q86Y78 171 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 MS4A15Q8N5U1 240 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 CFHR4Q92496 578 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 SERTAD4Q9NUC0 356 aa13.22□□□□□ -0.29
LINC00404-201ENST00000418660 TMEM30CPA0ZSE6 113 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 J3QR06 171 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 VSIG10L2P0DP72 767 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 BLCAPP62952 87 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 HABP2Q14520 560 aaPredicted RBP13.21□□□□□ -0.29
LINC00404-201ENST00000418660 SPHARQ15513 63 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 ACSM3Q53FZ2 586 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 AWAT2Q6E213 333 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 UNQ9370/PRO34162Q6UXP9 181 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 C16orf82Q7Z2V1 217 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 NKAIN3Q8N8D7 197 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 RFESDQ8TAC1 157 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 OR5M11Q96RB7 305 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 MMP28Q9H239 520 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 LIN7BQ9HAP6 207 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 SPACA1Q9HBV2 294 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 LSM2Q9Y333 95 aaKnown RBP13.21□□□□□ -0.29
LINC00404-201ENST00000418660 TPRKBQ9Y3C4 175 aa13.21□□□□□ -0.29
LINC00404-201ENST00000418660 AMMECR1Q9Y4X0 333 aaPredicted RBP13.21□□□□□ -0.29
LINC00404-201ENST00000418660 TRAV39A0A0B4J263 110 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 TSPAN15O95858 294 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 MYF6P23409 242 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 CD24P25063 80 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 SSTR5P35346 364 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 MNDAP41218 407 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 SLC35A2P78381 396 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 RBM39Q14498 530 aaKnown RBP13.2□□□□□ -0.3
LINC00404-201ENST00000418660 LTC4SQ16873 150 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 CCDC144NLQ6NUI1 221 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 NEK7Q8TDX7 302 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 AKR1E2Q96JD6 320 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 UQCC2Q9BRT2 126 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 RCC2Q9P258 522 aaKnown RBP13.2□□□□□ -0.3
LINC00404-201ENST00000418660 PSG11Q9UQ72 335 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 TRRAPQ9Y4A5 3859 aa13.2□□□□□ -0.3
LINC00404-201ENST00000418660 KIAA2026Q5HYC2 2103 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 MCRIP1C9JLW8 97 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 H0YHG0 523 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 MT-ND4P03905 459 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 CSF1P09603 554 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 GPR50Q13585 617 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 IRF3Q14653 427 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 MED22Q15528 200 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 ZNF497Q6ZNH5 498 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 Q6ZS46 218 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 C11orf44Q8N8P7 122 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 SGCDQ92629 289 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 LEAP2Q969E1 77 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 TMED9Q9BVK6 235 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 ANKRD60Q9BZ19 345 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 VCX3BQ9H321 246 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 DUSP21Q9H596 190 aa13.19□□□□□ -0.3
LINC00404-201ENST00000418660 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms