RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PLA2G3Q9NZ20 509 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 C5orf52A6NGY3 159 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 ARGFXA6NJG6 315 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF14P17017 642 aaPredicted RBP12.39□□□□□ -0.43
HDAC9-208ENST00000417496 FGF12P61328 243 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF154Q13106 437 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
HDAC9-208ENST00000417496 A0A0G2JRQ6 117 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 IGHV3-64DA0A0J9YX35 117 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 RAB5AP20339 215 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 RAB5CP51148 216 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 DUSP3P51452 185 aaPredicted RBP12.39□□□□□ -0.43
HDAC9-208ENST00000417496 COMMD1Q8N668 190 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 OR51H1Q8NH63 302 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 UBALD1Q8TB05 177 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 PLEKHF2Q9H8W4 249 aa12.39□□□□□ -0.43
HDAC9-208ENST00000417496 LYRM2Q9NU23 88 aaPredicted RBP12.39□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF727A8MUV8 499 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 AGAP20933 346 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 MAGEA5P43359 124 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 VAMP2P63027 116 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 FABP9Q0Z7S8 132 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 CEACAM21Q3KPI0 293 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 SOHLH1Q5JUK2 328 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 SPSB3Q6PJ21 355 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 MYPOPQ86VE0 399 aaPredicted RBP12.38□□□□□ -0.43
HDAC9-208ENST00000417496 WDR5BQ86VZ2 330 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 PLPPR1Q8TBJ4 325 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 LOXL2Q9Y4K0 774 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 DSPP15924 2871 aaKnown RBP12.38□□□□□ -0.43
HDAC9-208ENST00000417496 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 NEURL1O76050 574 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 IFNA4P05014 189 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 SERPINA7P05543 415 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 LHX2P50458 406 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 RAB1AP62820 205 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 NMSQ5H8A3 153 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 C6orf15Q6UXA7 325 aaPredicted RBP12.38□□□□□ -0.43
HDAC9-208ENST00000417496 PRR18Q8N4B5 295 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 SUMF2Q8NBJ7 301 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 Q8NFD4 153 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 LIPGQ9Y5X9 500 aa12.38□□□□□ -0.43
HDAC9-208ENST00000417496 CFAP47Q6ZTR5 3102 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 RBFOX3A6NFN3 312 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 NQO2P16083 231 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 PAX6P26367 422 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 RND3P61587 244 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF266Q14584 549 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 SSPNQ14714 243 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 SPATA46Q5T0L3 261 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 P4HA3Q7Z4N8 544 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF561Q8N587 486 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 TECTBQ96PL2 329 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 PGLYRP1O75594 196 aaPredicted RBP12.37□□□□□ -0.43
HDAC9-208ENST00000417496 RHBDL1O75783 438 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF806P0C7X5 589 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 CLDN18P56856 261 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 PCSK4Q6UW60 755 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 LINC00696Q6ZRV3 163 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 MKXQ8IYA7 352 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 OR2M7Q8NG81 312 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 OR1J1Q8NGS3 322 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 TAAR3PQ9P1P4 343 aa12.37□□□□□ -0.43
HDAC9-208ENST00000417496 YKT6O15498 198 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 PITX3O75364 302 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 TDGF1P13385 188 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 VDAC1P21796 283 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 RPS23P62266 143 aaKnown RBP12.36□□□□□ -0.43
HDAC9-208ENST00000417496 SRPXP78539 464 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 ID3Q02535 119 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 RNF212Q495C1 297 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 FAM185AQ8N0U4 392 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 IL22RA1Q8N6P7 574 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF703Q9H7S9 590 aaPredicted RBP12.36□□□□□ -0.43
HDAC9-208ENST00000417496 IFT22Q9H7X7 185 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 ERRFI1Q9UJM3 462 aaPredicted RBP12.36□□□□□ -0.43
HDAC9-208ENST00000417496 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 H0YL77 283 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 TUSC2O75896 110 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 CER1O95813 267 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 UCP1P25874 307 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 PAX9P55771 341 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 CTAG1AP78358 180 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 BOKQ9UMX3 212 aaPredicted RBP12.36□□□□□ -0.43
HDAC9-208ENST00000417496 MMP24Q9Y5R2 645 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 SPENQ96T58 3664 aaKnown RBP12.36□□□□□ -0.43
HDAC9-208ENST00000417496 MED13Q9UHV7 2174 aa12.36□□□□□ -0.43
HDAC9-208ENST00000417496 TRAV24A0A0B4J272 114 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 CD300LBA8K4G0 201 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 WRBO00258 174 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 JMJD7P0C870 316 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 PMELP40967 661 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 TMEM267Q0VDI3 215 aaPredicted RBP12.35□□□□□ -0.43
HDAC9-208ENST00000417496 HIKESHIQ53FT3 197 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 Q6ZRM9 215 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms