RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 GTF2F2P13984 249 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 NFYBP25208 207 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 MAPK3P27361 379 aaPredicted RBP12.57□□□□□ -0.4
ITGB1-204ENST00000417122 PRRX1P54821 245 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 GABPB1Q06547 395 aaPredicted RBP12.57□□□□□ -0.4
ITGB1-204ENST00000417122 MPV17LQ2QL34 196 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 HLA-DRB5Q30154 266 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 GLIPR1L1Q6UWM5 242 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 CDH26Q8IXH8 852 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 MRGPRDQ8TDS7 321 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 THRSPQ92748 146 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 MUL1Q969V5 352 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 CREB3L1Q96BA8 519 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 KIRREL1Q96J84 757 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 ZNF702PQ9H963 129 aa12.57□□□□□ -0.4
ITGB1-204ENST00000417122 MRPS28Q9Y2Q9 187 aaKnown RBP12.57□□□□□ -0.4
ITGB1-204ENST00000417122 FAM90A22PA8MWA6 464 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 BUB1B-PAK6H3BSN5 160 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 H3BUI4 141 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 IL1AP01583 271 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 CEACAM3P40198 252 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 HERPUD1Q15011 391 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 UTF1Q5T230 341 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 ATAD3CQ5T2N8 411 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 AWAT2Q6E213 333 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 Q6ZTK2 550 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 KLHDC1Q8N7A1 406 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 OR9G1Q8NH87 305 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 MMP27Q9H306 513 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 IDI2-AS1Q9NZ38 188 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 NBEAL1Q6ZS30 2694 aa12.56□□□□□ -0.4
ITGB1-204ENST00000417122 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 NPIPB11E5RHQ5 1161 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 BRS3P32247 399 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 ARHGDIBP52566 201 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 RBM39Q14498 530 aaKnown RBP12.55□□□□□ -0.4
ITGB1-204ENST00000417122 HABP2Q14520 560 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-204ENST00000417122 SPHARQ15513 63 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 TPTE2P1Q5T6R2 138 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 Q8N2B8 174 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 MS4A15Q8N5U1 240 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 NKAIN3Q8N8D7 197 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 RFESDQ8TAC1 157 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 NEK7Q8TDX7 302 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 SGCDQ92629 289 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 MRPS24Q96EL2 167 aaKnown RBP12.55□□□□□ -0.4
ITGB1-204ENST00000417122 OR5M11Q96RB7 305 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 PRSS22Q9GZN4 317 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 MMP28Q9H239 520 aa12.55□□□□□ -0.4
ITGB1-204ENST00000417122 LSM2Q9Y333 95 aaKnown RBP12.55□□□□□ -0.4
ITGB1-204ENST00000417122 TET2Q6N021 2002 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-204ENST00000417122 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 TMEM30CPA0ZSE6 113 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 H0YHG0 523 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 J3QR06 171 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 VSIG10L2P0DP72 767 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 MYF6P23409 242 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 CD24P25063 80 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 SSTR5P35346 364 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 SLC35A2P78381 396 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 MED22Q15528 200 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 LTC4SQ16873 150 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 ACSM3Q53FZ2 586 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 UNQ9370/PRO34162Q6UXP9 181 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 LYPD6Q86Y78 171 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 OR10A7Q8NGE5 316 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 VCX3BQ9H321 246 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 SERTAD4Q9NUC0 356 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 TPRKBQ9Y3C4 175 aa12.54□□□□□ -0.4
ITGB1-204ENST00000417122 OOSP1A8MZH6 123 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 LY6LH3BQJ8 138 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 TSPAN15O95858 294 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 IGHV3-7P01780 117 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 GZMHP20718 246 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 BLCAPP62952 87 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 INSL4Q14641 139 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 IRF3Q14653 427 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 C2orf68Q2NKX9 166 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 CCDC144NLQ6NUI1 221 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 C16orf82Q7Z2V1 217 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 LEAP2Q969E1 77 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 TMED9Q9BVK6 235 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 ANKRD60Q9BZ19 345 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 BANF2Q9H503 90 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 SPACA1Q9HBV2 294 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 PSG11Q9UQ72 335 aa12.53□□□□□ -0.4
ITGB1-204ENST00000417122 AMMECR1Q9Y4X0 333 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-204ENST00000417122 MCRIP1C9JLW8 97 aa12.52□□□□□ -0.41
ITGB1-204ENST00000417122 CRTAPO75718 401 aaPredicted RBP12.52□□□□□ -0.41
ITGB1-204ENST00000417122 CSF1P09603 554 aa12.52□□□□□ -0.41
ITGB1-204ENST00000417122 MGMTP16455 207 aa12.52□□□□□ -0.41
ITGB1-204ENST00000417122 MNDAP41218 407 aa12.52□□□□□ -0.41
ITGB1-204ENST00000417122 GNG10P50151 68 aa12.52□□□□□ -0.41
ITGB1-204ENST00000417122 GP2P55259 537 aaKnown RBP12.52□□□□□ -0.41
ITGB1-204ENST00000417122 GPR50Q13585 617 aa12.52□□□□□ -0.41
ITGB1-204ENST00000417122 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.41
ITGB1-204ENST00000417122 FAM27D1Q5T7N8 215 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms