RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 RPS19P39019 145 aaKnown RBP10.4□□□□□ -0.74
LINC00339-202ENST00000416769 PTGFRP43088 359 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 SERPINB10P48595 397 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 ZP1P60852 638 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 HAGHLQ6PII5 290 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-202ENST00000416769 ASCL4Q6XD76 172 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 REC114Q7Z4M0 266 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 CALHM1Q8IU99 346 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 CROCCP3Q8IVE0 287 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 SAXO1Q8IYX7 474 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 JAGN1Q8N5M9 183 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 PXT1Q8NFP0 134 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 ISOC1Q96CN7 298 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 RANBP3Q9H6Z4 567 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-202ENST00000416769 RSL24D1Q9UHA3 163 aaKnown RBP10.4□□□□□ -0.74
LINC00339-202ENST00000416769 POLDIP2Q9Y2S7 368 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 DSCAML1Q8TD84 2053 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 CCDC160A6NGH7 325 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 NOTOA8MTQ0 251 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 SLC17A2O00624 439 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 SYNGR1O43759 233 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-202ENST00000416769 CYB5AP00167 134 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 CLEC2LP0C7M8 214 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 TMEM225BP0DP42 221 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 CAPZA1P52907 286 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 MXD1Q05195 221 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 TMEM200BQ69YZ2 307 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 RFT1Q96AA3 541 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 MED30Q96HR3 178 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 DMRTB1Q96MA1 342 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 DNTTIP1Q9H147 329 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 RHOFQ9HBH0 211 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
LINC00339-202ENST00000416769 RFPL4AA6NLU0 287 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 IFITM5A6NNB3 132 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 RFPL4AL1F8VTS6 287 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 H3BMQ9 156 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 KDM4BO94953 1096 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 HTR2CP28335 458 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 POU3F4P49335 361 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 OR10A3P58181 314 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 KRTAP10-11P60412 298 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 BLCAPP62952 87 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 SLC25A26Q70HW3 274 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 NR2C2APQ86WQ0 139 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 Q8N2B8 174 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 Q8NFD4 153 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 OR4D6Q8NGJ1 314 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 OR5D13Q8NGL4 314 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 OR6M1Q8NGM8 313 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 TNFAIP8L1Q8WVP5 186 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 S100A13Q99584 98 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 METTL9Q9H1A3 318 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 DCSTAMPQ9H295 470 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 PLGRKTQ9HBL7 147 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 PCDHB16Q9NRJ7 776 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 RASL12Q9NYN1 266 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 MTCH1Q9NZJ7 389 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 ING4Q9UNL4 249 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 TCF19Q9Y242 345 aa10.38□□□□□ -0.75
LINC00339-202ENST00000416769 MRPS28Q9Y2Q9 187 aaKnown RBP10.38□□□□□ -0.75
LINC00339-202ENST00000416769 IGKV1-12A0A0C4DH73 117 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 WI2-2373I1.2A0A1W2PRP0 233 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 A6NDX4 124 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 AIPO00170 330 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 ZNF780AO75290 641 aaPredicted RBP10.37□□□□□ -0.75
LINC00339-202ENST00000416769 IGKV1D-12P01611 117 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 UBBP0CG47 229 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 PGA5P0DJD9 388 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 OR3A4PP47883 348 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 RORCP51449 518 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 DLX6P56179 175 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
LINC00339-202ENST00000416769 GPR176Q14439 515 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 SPCS2Q15005 226 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 TCTEX1D4Q5JR98 221 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 VAX1Q5SQQ9 334 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 SFXN4Q6P4A7 337 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 C10orf99Q6UWK7 81 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 GLIPR1L1Q6UWM5 242 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 NDUFA11Q86Y39 141 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 Q8IYB0 196 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 POC1AQ8NBT0 407 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 OR5D18Q8NGL1 313 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 NDNFQ8TB73 568 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 SLC25A46Q96AG3 418 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 SDSLQ96GA7 329 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 WNT10AQ9GZT5 417 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 FAM192AQ9GZU8 254 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 FAM234AQ9H0X4 552 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 IL36GQ9NZH8 169 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 STEAP1Q9UHE8 339 aa10.37□□□□□ -0.75
LINC00339-202ENST00000416769 TENM3Q9P273 2699 aa10.36□□□□□ -0.75
LINC00339-202ENST00000416769 TRBV23-1A0A0A0MS06 115 aa10.36□□□□□ -0.75
LINC00339-202ENST00000416769 FAM90A8PA6NJQ4 464 aa10.36□□□□□ -0.75
LINC00339-202ENST00000416769 RSU1Q15404 277 aa10.36□□□□□ -0.75
LINC00339-202ENST00000416769 RAB11BQ15907 218 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms