RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 OR51Q1Q8NH59 317 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR4C6Q8NH72 309 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 COQ8AQ8NI60 647 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 MRAPQ8TCY5 172 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 GPR148Q8TDV2 347 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SFT2D1Q8WV19 159 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SKA2Q8WVK7 121 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 GHSRQ92847 366 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARL11Q969Q4 196 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 PTX4Q96A99 478 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 MED8Q96G25 268 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZFP3Q96NJ6 502 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TEAD3Q99594 435 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TSNAXQ99598 290 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 GINS4Q9BRT9 223 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 MS4A8Q9BY19 250 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SMDT1Q9H4I9 107 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 EGLN3Q9H6Z9 239 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 KIR3DX1Q9H7L2 352 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 MEPEQ9NQ76 525 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 EXOSC3Q9NQT5 275 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 MMP26Q9NRE1 261 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 GSN-AS1Q9NRJ2 163 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 SMCO4Q9NRQ5 59 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 COMMD9Q9P000 198 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 METTL1Q9UBP6 276 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF629Q9UEG4 869 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 LSM7Q9UK45 103 aaKnown RBP2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 FBXL4Q9UKA2 621 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 IKZF2Q9UKS7 526 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TNFSF18Q9UNG2 199 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF337Q9Y3M9 751 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 V9GY05 133 aa2.99□□□□□ -1.93
HMGB3P23-201ENST00000414981 TP53BP1Q12888 1972 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 PIKFYVEQ9Y2I7 2098 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 IGHV3OR16-10A0A075B7F0 116 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 A0A0A6YYD5 115 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 A0A0B4J2A0 478 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 A0A1W2PPR1 153 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 GGT3PA6NGU5 568 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 C1orf196B1AJZ1 125 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 LINC00587B1AMM8 73 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 NPIPB9F8W1W9 429 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 CCL24O00175 119 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 PLPP1O14494 284 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TNFSF11O14788 317 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TAAR5O14804 337 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 PPP1R2P9O14990 202 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARPC5O15511 151 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 SGCEO43556 437 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 EFNA2O43921 213 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 EIF1BO60739 113 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TBL1XO60907 577 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 SRSF10O75494 262 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 GLSO94925 669 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM50AO95807 157 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 EPPINO95925 133 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 MT-ND4LP03901 98 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 IGF1P05019 195 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 CRHP06850 196 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 FBP1P09467 338 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 CD79AP11912 226 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TPT1P13693 172 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ABOP16442 354 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 CSNK2A2P19784 350 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TBXA2RP21731 343 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 CSKP41240 450 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 EIF1P41567 113 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 P2RY1P47900 373 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 NOVA1P51513 510 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 P2RX1P51575 399 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TAS2R19P59542 299 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 UBE2KP61086 200 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TBPL1P62380 186 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC7A9P82251 487 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 DEFA5Q01523 94 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TNFRSF9Q07011 255 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 RIGQ13278 110 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 LY6DQ14210 128 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 MEF2DQ14814 521 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF239Q16600 458 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF791Q3KP31 576 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARHGAP11BQ3KRB8 267 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM69Q5SWH9 247 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 STUMQ69YW2 141 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TNFAIP8L2Q6P589 184 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARL9Q6T311 187 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 C5orf46Q6UWT4 87 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 NPSR1Q6W5P4 371 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 C17orf107Q6ZR85 190 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 LINC00336Q6ZUF6 198 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 NUFIP2Q7Z417 695 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 LYG2Q86SG7 212 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 C17orf64Q86WR6 236 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZDHHC22Q8N966 263 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 INO80EQ8NBZ0 244 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR2D3Q8NGH3 330 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR4A4PQ8NGN8 299 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR5AK3PQ8NH89 298 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms