RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 C22orf15Q8WYQ4 148 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 FOPNLQ96NB1 174 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 ZNF382Q96SR6 550 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 WACQ9BTA9 647 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 THTPAQ9BU02 230 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 METTL17Q9H7H0 456 aaPredicted RBP1.96□□□□□ -2.1
MCF2-204ENST00000414978 PARVBQ9HBI1 364 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 SDHAF2Q9NX18 166 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 TAS2R1Q9NYW7 299 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 ATPIF1Q9UII2 106 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 BTRCQ9Y297 605 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 MMACHCQ9Y4U1 282 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 DNAJC15Q9Y5T4 150 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 SVILO95425 2214 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 ASPMQ8IZT6 3477 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 IGHV3OR16-13A0A075B7E8 117 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 A0A1B0GWB2 263 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 A0A1W2PQL4 384 aaPredicted RBP1.96□□□□□ -2.1
MCF2-204ENST00000414978 PSMD12O00232 456 aaPredicted RBP1.96□□□□□ -2.1
MCF2-204ENST00000414978 MGRN1O60291 552 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 SNAP29O95721 258 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 TNFP01375 233 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 IGHV2-5P01817 119 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 CCL4P13236 92 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 F8A1P23610 371 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 GALR1P47211 349 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 FBXW4P57775 412 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 PRKCDQ05655 676 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 CHRNB3Q05901 458 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 KRTAP1-1Q07627 177 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 UNC119Q13432 240 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 TAL2Q16559 108 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 DEFB113Q30KQ7 82 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 NPSR1Q6W5P4 371 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 OR2W3Q7Z3T1 314 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 TMEM179BQ7Z7N9 219 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 SLC30A8Q8IWU4 369 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 C6orf223Q8N319 242 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 ZNF645Q8N7E2 425 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 OR10J5Q8NHC4 309 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 DGCR14Q96DF8 476 aaKnown RBP1.96□□□□□ -2.1
MCF2-204ENST00000414978 SERPINI1Q99574 410 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 LITAFQ99732 161 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 CIB1Q99828 191 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 AGMATQ9BSE5 352 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 HDHD3Q9BSH5 251 aaPredicted RBP1.96□□□□□ -2.1
MCF2-204ENST00000414978 EFCAB1Q9HAE3 211 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 RDH14Q9HBH5 336 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 CALYQ9NYX4 217 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 LRRK2Q5S007 2527 aa1.96□□□□□ -2.1
MCF2-204ENST00000414978 IGHV4-30-2A0A087WSY4 118 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 IGHV3-16A0A0C4DH30 117 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 STK16O75716 305 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 IDO1P14902 403 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 TFPI2P48307 235 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 NCBP2P52298 156 aaKnown RBP eCLIP1.95□□□□□ -2.1
MCF2-204ENST00000414978 FOXA1P55317 472 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 AP1S2P56377 157 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 RPL32P62910 135 aaKnown RBP1.95□□□□□ -2.1
MCF2-204ENST00000414978 MXD1Q05195 221 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ZNF763Q0D2J5 394 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 STX5Q13190 355 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ATP6V1FQ16864 119 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ATP6AP1LQ52LC2 224 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 TPRG1LQ5T0D9 272 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 C1orf146Q5VVC0 180 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 CYHR1Q6ZMK1 362 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 DEFB107AQ8IZN7 70 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ZADH2Q8N4Q0 377 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 CD177Q8N6Q3 437 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 TAF15Q92804 592 aaKnown RBP eCLIP1.95□□□□□ -2.1
MCF2-204ENST00000414978 RCN3Q96D15 328 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 VSIG2Q96IQ7 327 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ZNF251Q9BRH9 671 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 DCUN1D5Q9BTE7 237 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 SRXN1Q9BYN0 137 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 SLC19A3Q9BZV2 496 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ARMC7Q9H6L4 198 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 PLSCR3Q9NRY6 295 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 AIG1Q9NVV5 245 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 CCDC167Q9P0B6 97 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 WIF1Q9Y5W5 379 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ATMQ13315 3056 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 SMIM26A0A096LP01 95 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 CCDC182A6NF36 153 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 NDUFC2-KCTD14E9PQ53 114 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 SMKR1H3BMG3 65 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 C19orf84I3L1E1 186 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 LIN7AO14910 233 aaPredicted RBP1.95□□□□□ -2.1
MCF2-204ENST00000414978 ZFAND5O76080 213 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 UTS2O95399 124 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 IFNA6P05013 189 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 C8orf88P0DMB2 117 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 FUT3P21217 361 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 RAP1GDS1P52306 607 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 IL5RAQ01344 420 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ZNHIT3Q15649 155 aaPredicted RBP1.95□□□□□ -2.1
MCF2-204ENST00000414978 TIMM50Q3ZCQ8 353 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 C14orf177Q52M58 125 aa1.95□□□□□ -2.1
MCF2-204ENST00000414978 ZNF544Q6NX49 715 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms