RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 IL1AP01583 271 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 GADD45AP24522 165 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 SAA4P35542 130 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 SCAND1P57086 179 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 BAMBIQ13145 260 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 P2RY14Q15391 338 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 C6orf183Q5T699 404 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 RUSC1-AS1Q66K80 236 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 ZNF497Q6ZNH5 498 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 ZNF554Q86TJ5 538 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 LDLRAD3Q86YD5 345 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 CROCCP3Q8IVE0 287 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 OR56B1Q8NGI3 324 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 ZNF596Q8TC21 504 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 MRPS26Q9BYN8 205 aaKnown RBP11.97□□□□□ -0.49
LIMS1-206ENST00000414829 DPAGT1Q9H3H5 408 aa11.97□□□□□ -0.49
LIMS1-206ENST00000414829 TBL2Q9Y4P3 447 aaKnown RBP11.97□□□□□ -0.49
LIMS1-206ENST00000414829 DOCK11Q5JSL3 2073 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 MEIOCA2RUB1 952 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 AIREO43918 545 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 RAB6AP20340 208 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 COX7A1P24310 79 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 CDK2P24941 298 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 ARHGDIBP52566 201 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 QRFPP83859 136 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 KLRD1Q13241 179 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 UNC119Q13432 240 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 ARL6IP1Q15041 203 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 DEFB112Q30KQ8 113 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 MINOS1Q5TGZ0 78 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 ZNF782Q6ZMW2 699 aaPredicted RBP11.96□□□□□ -0.49
LIMS1-206ENST00000414829 PDZD9Q8IXQ8 264 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 BCL6BQ8N143 479 aaPredicted RBP11.96□□□□□ -0.49
LIMS1-206ENST00000414829 C11orf42Q8N5U0 333 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 OR11H6Q8NGC7 330 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 OR51D1Q8NGF3 324 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 PTX4Q96A99 478 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 GFI1Q99684 422 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 OR51E2Q9H255 320 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 TMEM133Q9H2Q1 129 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 RIMS4Q9H426 269 aaPredicted RBP11.96□□□□□ -0.49
LIMS1-206ENST00000414829 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 LIN7BQ9HAP6 207 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 ING3Q9NXR8 418 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 CALYQ9NYX4 217 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 RAB22AQ9UL26 194 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.49
LIMS1-206ENST00000414829 IGHV2-26A0A0B4J1V2 119 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 METTL21EPA6NDL7 271 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 POM121CA8CG34 1229 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 ORC5O43913 435 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 CHATP28329 748 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 CD34P28906 385 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 OR10A3P58181 314 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 RPL15P61313 204 aaKnown RBP11.95□□□□□ -0.5
LIMS1-206ENST00000414829 AANATQ16613 207 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 NKAPLQ5M9Q1 402 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 HES5Q5TA89 166 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 ZNF626Q68DY1 528 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 SLC16A12Q6ZSM3 486 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 MOB1BQ7L9L4 216 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 PNKDQ8N490 385 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 OR5R1Q8NH85 324 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 PLPPR1Q8TBJ4 325 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 PLEKHJ1Q9NW61 149 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 TRAPPC2LQ9UL33 140 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 HSF4Q9ULV5 492 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 MGAT4AQ9UM21 535 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
LIMS1-206ENST00000414829 A0A087X0M5 115 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 A0A0U1RQK1 487 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 A0A1B0GX30 115 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 DNAJC9-AS1A6NH13 148 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 RNF212BA8MTL3 300 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 SPINT2O43291 252 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 ARG1P05089 322 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 BLVRBP30043 206 aaPredicted RBP11.94□□□□□ -0.5
LIMS1-206ENST00000414829 CEACAM3P40198 252 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 UBA52P62987 128 aaKnown RBP11.94□□□□□ -0.5
LIMS1-206ENST00000414829 MRPS15P82914 257 aaKnown RBP11.94□□□□□ -0.5
LIMS1-206ENST00000414829 DYNC1I2Q13409 638 aaKnown RBP11.94□□□□□ -0.5
LIMS1-206ENST00000414829 C2orf76Q3KRA6 126 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 PRAMEF5Q5TYX0 476 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 OR10K2Q6IF99 312 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 SFXN4Q6P4A7 337 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 Q6YL49 198 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 GAPTQ8N292 157 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 FAM89BQ8N5H3 189 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 OR13A1Q8NGR1 328 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 MRGPRDQ8TDS7 321 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 FAM216AQ8WUB2 273 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 YIPF6Q96EC8 236 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 LPAR5Q9H1C0 372 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 KCNIP1Q9NZI2 227 aa11.94□□□□□ -0.5
LIMS1-206ENST00000414829 AMMECR1Q9Y4X0 333 aaPredicted RBP11.94□□□□□ -0.5
LIMS1-206ENST00000414829 SHISA3A0PJX4 238 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 ODF3BA8MYP8 253 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 NPIPB11E5RHQ5 1161 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms