RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MINOS1Q5TGZ0 78 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 CEACAM19Q7Z692 300 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 RTN4RL2Q86UN3 420 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 NKAIN3Q8N8D7 197 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 OR4P4Q8NGL7 312 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 UFD1Q92890 307 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 TMEM203Q969S6 136 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 BANF2Q9H503 90 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 C16orf95Q9H693 158 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 ZNF286AQ9HBT8 521 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 TCF7L1Q9HCS4 588 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 ABCB10Q9NRK6 738 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 RAB26Q9ULW5 256 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 MEGF11A6BM72 1044 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 CD34P28906 385 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 PROK1P58294 105 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 PAX5Q02548 391 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 RBM48Q5RL73 367 aaKnown RBP11.95□□□□□ -0.5
LIMS4-201ENST00000413601 CCBE1Q6UXH8 406 aaPredicted RBP11.95□□□□□ -0.5
LIMS4-201ENST00000413601 PRSS48Q7RTY5 328 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 LRRTM1Q86UE6 522 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 TMEM104Q8NE00 496 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 ZNF596Q8TC21 504 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 MRGPRDQ8TDS7 321 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 NEK7Q8TDX7 302 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 KIRREL1Q96J84 757 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 UQCC2Q9BRT2 126 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 CALYQ9NYX4 217 aa11.95□□□□□ -0.5
LIMS4-201ENST00000413601 A0A087X0M5 115 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 A0A1B0GX30 115 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 TOR1AO14656 332 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 CRTAPO75718 401 aaPredicted RBP11.94□□□□□ -0.5
LIMS4-201ENST00000413601 SC5DO75845 299 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 IGLV1-47P01700 117 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 MGMTP16455 207 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 SRMP19623 302 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 VHLP40337 213 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 TPBGQ13641 420 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 LTC4SQ16873 150 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 LIAT1Q6ZQX7 453 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 TMEM219Q86XT9 240 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 RFESDQ8TAC1 157 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 MRPS24Q96EL2 167 aaKnown RBP11.94□□□□□ -0.5
LIMS4-201ENST00000413601 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 KRTAP3-2Q9BYR7 98 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 SELENOIQ9C0D9 397 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 RAB18Q9NP72 206 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 ISYNA1Q9NPH2 558 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 IDI2-AS1Q9NZ38 188 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 DPM3Q9P2X0 92 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 TCF19Q9Y242 345 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
LIMS4-201ENST00000413601 TMEM30CPA0ZSE6 113 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 A6NDX4 124 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 IL1AP01583 271 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 IGHV3-7P01780 117 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 UCHL1P09936 223 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 CPEP16870 476 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 GABRA5P31644 462 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 SSTR5P35346 364 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 DYNLT3P51808 116 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 PRRX1P54821 245 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 RPS25P62851 125 aaKnown RBP11.93□□□□□ -0.5
LIMS4-201ENST00000413601 MLLT11Q13015 90 aaPredicted RBP11.93□□□□□ -0.5
LIMS4-201ENST00000413601 RBM39Q14498 530 aaKnown RBP11.93□□□□□ -0.5
LIMS4-201ENST00000413601 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 HSD17B12Q53GQ0 312 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 TMEM91Q6ZNR0 172 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 OR4C13Q8NGP0 309 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 CCDC107Q8WV48 283 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 PHYHIPQ92561 330 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 LEAP2Q969E1 77 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 FAM46BQ96A09 425 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 MGLLQ99685 303 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 CITED1Q99966 193 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
LIMS4-201ENST00000413601 LEUTXA8MZ59 168 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 MCRIP1C9JLW8 97 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 NPIPB11E5RHQ5 1161 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 BUB1B-PAK6H3BSN5 160 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 F2RL2O00254 374 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 KIR2DS4P43632 304 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 C1orf100Q5SVJ3 147 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 GLT8D1Q68CQ7 371 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 RAB12Q6IQ22 244 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 ZNF497Q6ZNH5 498 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 Q96M66 194 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 NPFFR1Q9GZQ6 430 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 ZNF696Q9H7X3 374 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 SPACA1Q9HBV2 294 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 RCC2Q9P258 522 aaKnown RBP11.92□□□□□ -0.5
LIMS4-201ENST00000413601 FBLN5Q9UBX5 448 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 BLOC1S6Q9UL45 172 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 PEX16Q9Y5Y5 336 aa11.92□□□□□ -0.5
LIMS4-201ENST00000413601 TET2Q6N021 2002 aaPredicted RBP11.91□□□□□ -0.5
LIMS4-201ENST00000413601 FAM90A10PA6NDY2 464 aa11.91□□□□□ -0.5
LIMS4-201ENST00000413601 FAM90A18PA6NE21 464 aa11.91□□□□□ -0.5
LIMS4-201ENST00000413601 FAM90A16PA6NEW6 464 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms