RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-204ENST00000413232 MOB4Q9Y3A3 225 aa15.22■□□□□ 0.03
CPSF7-204ENST00000413232 SIRT4Q9Y6E7 314 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-204ENST00000413232 HSPE1-MOB4S4R3N1 261 aa15.22■□□□□ 0.03
CPSF7-204ENST00000413232 DNAH9Q9NYC9 4486 aa15.22■□□□□ 0.03
CPSF7-204ENST00000413232 LOC100130705A0A1B0GUX0 176 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 WI2-2373I1.2A0A1W2PRP0 233 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 CDRT1O95170 752 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 CCDC159P0C7I6 412 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 FAM106CPP0CH98 169 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 RAB3AP20336 220 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 GNG10P50151 68 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 GBX2P52951 348 aaPredicted RBP15.21■□□□□ 0.03
CPSF7-204ENST00000413232 RAB40BQ12829 278 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 HNF4GQ14541 408 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 IL13RA2Q14627 380 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 SMN1Q16637 294 aaKnown RBP15.21■□□□□ 0.03
CPSF7-204ENST00000413232 FAM53AQ6NSI3 398 aaPredicted RBP15.21■□□□□ 0.03
CPSF7-204ENST00000413232 ZFP1Q6P2D0 407 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 C5orf56Q8N8D9 126 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 LINC00482Q8N8I6 264 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 ORAI1Q96D31 301 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 GPER1Q99527 375 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 JAM3Q9BX67 310 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 BARHL1Q9BZE3 327 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 FAM118AQ9NWS6 357 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 LINC00527Q9UJ94 153 aa15.21■□□□□ 0.03
CPSF7-204ENST00000413232 M0QZK8 103 aa15.2■□□□□ 0.02
CPSF7-204ENST00000413232 HTR3BO95264 441 aa15.2■□□□□ 0.02
CPSF7-204ENST00000413232 C21orf33P30042 268 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-204ENST00000413232 SLC35A2P78381 396 aa15.2■□□□□ 0.02
CPSF7-204ENST00000413232 PAX5Q02548 391 aa15.2■□□□□ 0.02
CPSF7-204ENST00000413232 SUMF2Q8NBJ7 301 aa15.2■□□□□ 0.02
CPSF7-204ENST00000413232 Q96MT0 163 aa15.2■□□□□ 0.02
CPSF7-204ENST00000413232 FAM192AQ9GZU8 254 aa15.2■□□□□ 0.02
CPSF7-204ENST00000413232 PSMB11A5LHX3 300 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 LINC01548A6NM66 108 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 MPZL2O60487 215 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 WBP4O75554 376 aaKnown RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 RPSAP08865 295 aaKnown RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 HOXD3P31249 432 aaPredicted RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 ETV1P50549 477 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 MRPL28Q13084 256 aaKnown RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 MADCAM1Q13477 382 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 RSU1Q15404 277 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 OR2G6Q5TZ20 316 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 MRPL41Q8IXM3 137 aaKnown RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 UBALD1Q8TB05 177 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 RBMXL1Q96E39 390 aaKnown RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 RCC1LQ96I51 464 aaKnown RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 C9orf16Q9BUW7 83 aa15.19■□□□□ 0.02
CPSF7-204ENST00000413232 DPCDQ9BVM2 203 aaPredicted RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 AMMECR1Q9Y4X0 333 aaPredicted RBP15.19■□□□□ 0.02
CPSF7-204ENST00000413232 A0A1W2PP11 408 aa15.18■□□□□ 0.02
CPSF7-204ENST00000413232 IGKV1D-33P01593 117 aa15.18■□□□□ 0.02
CPSF7-204ENST00000413232 IGKV1-33P01594 117 aa15.18■□□□□ 0.02
CPSF7-204ENST00000413232 TMEM11P17152 192 aa15.18■□□□□ 0.02
CPSF7-204ENST00000413232 HES1Q14469 280 aa15.18■□□□□ 0.02
CPSF7-204ENST00000413232 OR13C5Q8NGS8 318 aa15.18■□□□□ 0.02
CPSF7-204ENST00000413232 FGF20Q9NP95 211 aaPredicted RBP15.18■□□□□ 0.02
CPSF7-204ENST00000413232 ING4Q9UNL4 249 aa15.18■□□□□ 0.02
CPSF7-204ENST00000413232 ST3GAL6Q9Y274 331 aa15.18■□□□□ 0.02
CPSF7-204ENST00000413232 RPL36Q9Y3U8 105 aaKnown RBP15.18■□□□□ 0.02
CPSF7-204ENST00000413232 IGHV3-72A0A0B4J1Y9 119 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 C15orf65H3BRN8 121 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 GEMIN2O14893 280 aaKnown RBP15.17■□□□□ 0.02
CPSF7-204ENST00000413232 MAGEB3O15480 346 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 LALBAP00709 142 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 RPL23AP62750 156 aaKnown RBP15.17■□□□□ 0.02
CPSF7-204ENST00000413232 EGFEM1PQ0D2K5 195 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 HAVCR2Q8TDQ0 301 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 GPR148Q8TDV2 347 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 TMEM106AQ96A25 262 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 MYCBPQ99417 103 aaPredicted RBP15.17■□□□□ 0.02
CPSF7-204ENST00000413232 PCDHB16Q9NRJ7 776 aa15.17■□□□□ 0.02
CPSF7-204ENST00000413232 NBEAL2Q6ZNJ1 2754 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 MAGEA13PA6NCF6 341 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 OR7C1O76099 320 aaPredicted RBP15.16■□□□□ 0.02
CPSF7-204ENST00000413232 REG1BP48304 166 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 KCNJ3P48549 501 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 THBS3P49746 956 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 RAB7AP51149 207 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 RBM11P57052 281 aaKnown RBP15.16■□□□□ 0.02
CPSF7-204ENST00000413232 KLHL22Q53GT1 634 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 C11orf87Q6NUJ2 197 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 RPL22L1Q6P5R6 122 aaKnown RBP15.16■□□□□ 0.02
CPSF7-204ENST00000413232 C8orf86Q6ZUL3 223 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 OR2W3Q7Z3T1 314 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 OR8H3Q8N146 312 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 CYYR1Q96J86 154 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 IFT22Q9H7X7 185 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 S100A14Q9HCY8 104 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 IL36GQ9NZH8 169 aa15.16■□□□□ 0.02
CPSF7-204ENST00000413232 IGHV1-3A0A0C4DH29 117 aa15.15■□□□□ 0.02
CPSF7-204ENST00000413232 OGG1O15527 345 aa15.15■□□□□ 0.02
CPSF7-204ENST00000413232 FGF16O43320 207 aa15.15■□□□□ 0.02
CPSF7-204ENST00000413232 IGHG2P01859 326 aa15.15■□□□□ 0.02
CPSF7-204ENST00000413232 EBI3Q14213 229 aa15.15■□□□□ 0.02
CPSF7-204ENST00000413232 NHLRC3Q5JS37 347 aa15.15■□□□□ 0.02
CPSF7-204ENST00000413232 DDI2Q5TDH0 399 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms