RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 TATDN3Q17R31 274 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 HFEQ30201 348 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 SCGB2B2Q4G0G5 96 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 SLC35E4Q6ICL7 350 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DUX4L9Q6RFH8 374 aaPredicted RBP5.55□□□□□ -1.52
VPS41-204ENST00000413141 ZNF788Q6ZQV5 615 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 LHFPL1Q86WI0 220 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 ZNF561Q8N587 486 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 FAM216BQ8N7L0 139 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 ZNRF1Q8ND25 227 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 OR13C8Q8NGS7 320 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 NEU4Q8WWR8 484 aaPredicted RBP5.55□□□□□ -1.52
VPS41-204ENST00000413141 SNX22Q96L94 193 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 SLC25A21Q9BQT8 299 aaPredicted RBP5.55□□□□□ -1.52
VPS41-204ENST00000413141 CABLES2Q9BTV7 478 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 CLEC4MQ9H2X3 399 aaPredicted RBP5.55□□□□□ -1.52
VPS41-204ENST00000413141 ZNF665Q9H7R5 613 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 PLEKHF2Q9H8W4 249 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 MBNL3Q9NUK0 354 aaKnown RBP5.55□□□□□ -1.52
VPS41-204ENST00000413141 NECAP2Q9NVZ3 263 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 ING3Q9NXR8 418 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DUX4Q9UBX2 424 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 KIF25Q9UIL4 384 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 SCP2D1Q9UJQ7 156 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 MGAT4AQ9UM21 535 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 PPIAL4AQ9Y536 164 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 MAB21L2Q9Y586 359 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 ROS1P08922 2347 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DYSFO75923 2080 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 MEIKINA0A087WXM9 373 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 TRAV39A0A0B4J263 110 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 IGKV1-6A0A0C4DH72 117 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 FUOMA2VDF0 154 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 LYNX1G3V0Z9 82 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 J3QKU1 62 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 SDCBPO00560 298 aaPredicted RBP5.54□□□□□ -1.52
VPS41-204ENST00000413141 MGST3O14880 152 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 PEX14O75381 377 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 LY6HO94772 140 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 FSTL3O95633 263 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 IGHV2-70P01814 119 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 TK1P04183 234 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 SCTP09683 121 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 H2AFB2P0C5Z0 115 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 OR5H8P0DN80 308 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 LYNX1P0DP58 116 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 COX6B1P14854 86 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 COL8A2P25067 703 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 CDKN1AP38936 164 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 BCAP31P51572 246 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 MECP2P51608 486 aaKnown RBP5.54□□□□□ -1.52
VPS41-204ENST00000413141 P2RX3P56373 397 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 RAB25P57735 213 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 TSPAN5P62079 268 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 BTG1P62324 171 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 IL13RA1P78552 427 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 AESQ08117 197 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 EDDM3AQ14507 147 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 HMGN3Q15651 99 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 IGSF11Q5DX21 431 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 KRBOX4Q5JUW0 171 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 ATPAF1Q5TC12 328 aaPredicted RBP5.54□□□□□ -1.52
VPS41-204ENST00000413141 AADACL3Q5VUY0 350 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 ZNF660Q6AZW8 331 aaPredicted RBP5.54□□□□□ -1.52
VPS41-204ENST00000413141 TMEM17Q86X19 198 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 CADM3Q8N126 398 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 TPRX1Q8N7U7 411 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 DEFB108BQ8NET1 73 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 TMEM185AQ8NFB2 350 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 OR4A4PQ8NGN8 299 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 PPP1R35Q8TAP8 253 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 CCDC107Q8WV48 283 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 GIMAP1Q8WWP7 306 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 IGFBPL1Q8WX77 278 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 CCL13Q99616 98 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 ZNF2Q9BSG1 426 aaPredicted RBP5.54□□□□□ -1.52
VPS41-204ENST00000413141 FXYD6Q9H0Q3 95 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 FAM234AQ9H0X4 552 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 DNTTIP1Q9H147 329 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 DLL4Q9NR61 685 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 TRAPPC2LQ9UL33 140 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 FLVCR2Q9UPI3 526 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 VSIG4Q9Y279 399 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 ALG5Q9Y673 324 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 LRRK2Q5S007 2527 aa5.54□□□□□ -1.52
VPS41-204ENST00000413141 COL12A1Q99715 3063 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 ODAMA1E959 279 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 C7orf66A4D0T2 115 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 OR5H14A6NHG9 310 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 CEACAM18A8MTB9 384 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 C12orf77C9JDV5 145 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 NPIPB11E5RHQ5 1161 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 OVOL3O00110 214 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 TNFRSF13BO14836 293 aaPredicted RBP5.53□□□□□ -1.52
VPS41-204ENST00000413141 BET1O15155 118 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 TMPRSS2O15393 492 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 PRAF2O60831 178 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 DIRAS3O95661 229 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 DHFRP00374 187 aa5.53□□□□□ -1.52
VPS41-204ENST00000413141 RLN1P04808 185 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms